Job Description P31680 Confidence 73.13% Date Thu Jan 5 11:48:37 GMT 2012 Rank 43 Aligned Residues 78 % Identity 17% Template d1aisb2 SCOP info Cyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		A	V	L	Y	V	I	A	E	E	L	G	I	S	R	A	Q	F	D	Q	F	L	R	M	M	Q	G	G	A	Q	F	G	G	G	Y	Q	Q	Q	T	G	G	G	N	W	Q	.	.	.	.	.	.	.	Q	A	Q	R	G	P	T	L	E	D	A	C	N	V	L	G	V	K	P	T	D	D	A	T	T	I	K	R	A
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		D	Y	V	N	K	F	A	D	E	L	G	L	S	E	K	V	R	R	R	A	I	E	I	L	D	E	A	Y	K	R	G	L	T	S	G	K	S	P	A	G	L	V	A	A	A	L	Y	I	A	S	L	L	E	G	E	K	R	T	Q	R	E	V	A	E	V	A	R	V	T	E	V	.	.	.	.	T	V	R	N	R
Template Known Secondary structure		G	G									T																			T	T			T	T	S																	T	T													T					.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280					.	.	.	.	.
		225	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	K	L	M	S	E	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	E	L	V	E	K	L	K
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		1286	.	.	.	1290	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions