Job Description P31680 Confidence 21.60% Date Thu Jan 5 11:48:37 GMT 2012 Rank 102 Aligned Residues 103 % Identity 15% Template c3k69A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution Resolution 1.95 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	V	I	A	E	E	L	G	I	S	R	A	Q	F	D	Q	F	L	R	M	M	Q	G	G	A	Q	F	G	G	G	Y	Q	Q	Q	T	G	G	G	N	W	Q	Q	A	Q	R	G	P	T	L	E	D	A	C	N	V	L	G	V	K	P	T	D	D	A	T	T	I	K	R	A	Y	R	K	L	M	S	E	H	H
Query Conservation
Alig confidence																								.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	E	L	A	Q	S	L	H	L	N	P	V	X	I	R	N	I	L	S	V	L	.	H	K	H	G	Y	L	T	G	T	V	G	K	N	G	G	Y	Q	L	D	L	A	L	A	D	X	N	L	G	D	L	Y	D	L	T	I	P	P	T	I	S	Y	.	.	.	.	.	.	.	.	.	.	A	R	F	I	T	G
Template Known Secondary structure										T	S		G	G	G	T								.			T	T	S	S					S	T	T							S		G	G	G	S	B									S				S			.	.	.	.	.	.	.	.	.	.	G	G	G			S
Template Predicted Secondary structure																								.																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.											.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	K	L	V	A	K	G	L	P	P	E	M	M	E	M	A	K	Q	K	A	Q	E	I	Q	Q	A	Y	E	L	I	K	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	K	A	D	Q	S	P	I	A	A	N	I	S	E	T	L	T	D	L	F	T	V	A	D	R	Q	Y	R	A	Y	Y	H	Q
Template Known Secondary structure																																			T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions