 |
Job Description | P31680 | Confidence | 99.25% | Date | Thu Jan 5 11:48:37 GMT 2012 |
Rank | 22 | Aligned Residues | 58 |
% Identity | 40% | Template | c2kqxA_ |
PDB info |
PDB header:chaperone binding protein | Chain: A: PDB Molecule:curved dna-binding protein; |
PDBTitle: nmr structure of the j-domain (residues 2-72) in the2 escherichia coli cbpa
|
Resolution | UNK |
|
 |
  |   |
202 | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | E | D | A | C | N | V | L | G | V | K | P | T | D | D | A | T | T | I | K | R | A | Y | R | K | L | M | S | E | H | H | P | D | K | L | V | A | K | G | L | P | P | E | M | M | E | M | A | K | Q | K | A | Q | E | I | Q | Q | A | Y | E | L | I | K | Q | Q |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |
|   |
Template Sequence |   |
E | L | K | D | Y | Y | A | I | M | G | V | K | P | T | D | D | L | K | T | I | K | T | A | Y | R | R | L | A | R | K | Y | H | P | D | V | S | K | E | P | D | . |
. |
. |
. |
. |
. |
. |
. |
A | E | A | R | F | K | E | V | A | E | A | W | E | V | L | S | D | E |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  | T | T |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|
| S | S | S | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|