 |
Job Description | P0AD33 | Confidence | 3.50% | Date | Wed Jan 25 15:20:24 GMT 2012 |
Rank | 26 | Aligned Residues | 54 |
% Identity | 11% | Template | c3bf4B_ |
PDB info |
PDB header:unknown function | Chain: B: PDB Molecule:ethyl tert-butyl ether degradation ethd protein; |
PDBTitle: crystal structure of an ethd-like protein (reut_b5694) from ralstonia2 eutropha jmp134 at 2.10 a resolution
|
Resolution | 2.10 Å |
|
 |
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |
|
|  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | S | Y | S | R | V | F | A | N | R | A | E | A | E | Q | T | L | A | A | L | T | E | K | A | R | S | V | E | S | E | . |
. |
. |
P | C | K | I | T | P | T | F | T | E | E | S | D | G | . |
. |
. |
. |
. |
. |
. |
. |
V | R | L | D | I | D | F | T | F | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |
|
|
|   |
|
|
|
| . | . | . |
|   |   |
|
|
|   |
|   |   |   |
|
|
| . | . | . | . | . | . | . | . |   |   |
|   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|
|   |
|
|
|   |   |   |
|
|
|
|
|   |
|   |   |
|   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|
|
Template Sequence |   |
I | K | V | N | V | X | Y | P | Y | T | E | G | A | R | F | D | H | A | Y | Y | C | D | R | H | X | P | X | V | K | A | R | L | G | S | A | C | A | Y | Y | T | V | E | K | G | L | A | G | S | A | S | G | A | P | P | A | F | V | A | X | C | A | F | I | C | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
| T | T |
|
| B |
|  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  | G | G | G |
| S |  |  |  |  |  |  |
|
|
|
| S | S | T | T |
|
|
| S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|