Job Description P23876 Confidence 100.00% Date Thu Jan 5 11:40:14 GMT 2012 Rank 1 Aligned Residues 313 % Identity 32% Template d1l7va_ SCOP info ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC Resolution 3.20

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	T	R	A	I	A	V	P	G	L	L	L	L	L	I	I	A	T	A	L	S	L	L	I	G	A	K	S	L	P	A	S	V	V	L	E	A	F	S	G	T	C	Q	S	A	D	C	T	I	V	L	D	A	R	L	P	R	T	L	A	G	L	L	A	G	G	A	L	G	L	A	G	A	L	M	Q	T	L	T
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		Q	R	Q	N	I	R	W	L	L	C	L	S	V	L	X	L	L	A	L	L	L	S	L	C	A	G	E	Q	W	I	S	P	G	D	W	F	.	.	.	.	.	.	.	T	P	R	G	E	L	F	V	W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	X	Q	A	L	F
Template Known Secondary structure																										B	S	S	S	B			S	G	G	G	S	.	.	.	.	.	.	.	S	T	T	T	T	T					T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.								.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	P	L	A	D	P	G	L	L	G	V	N	A	G	A	S	F	A	I	V	L	G	A	A	L	F	G	Y	S	S	A	Q	E	Q	L	A	M	A	F	A	G	A	L	V	A	S	L	I	V	A	F	T	G	S	Q	G	G	G	Q	L	S	P	V	R	L	T	L	A	G	V	A	L	A	A	V	L	E	G	L
Query Conservation
Alig confidence																																																											.	.
Template Conservation																																																											.	.
Template Sequence		E	N	P	L	A	E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	.	.	H	L	S	T	S	R	L	L	L	A	G	V	A	L	G	I	I	C	S	A	L
Template Known Secondary structure		T		T	T			T	T	T	T	T															T	S		T	T																												.	.	T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		166	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		T	S	G	I	A	.	L	L	N	P	D	V	Y	D	Q	L	R	F	W	Q	A	G	S	L	D	I	R	N	L	H	T	L	K	V	V	L	I	P	V	L	I	A	G	A	T	A	L	L	L	S	R	A	L	N	S	L	S	L	G	S	D	T	A	T	A	L	G	S	R	V	A	R	T	Q	L	I	G	L	L	A
Query Conservation							.
Alig confidence							.																																	.
Template Conservation																																								.
Template Sequence		X	T	W	A	I	Y	F	S	T	S	V	D	L	R	Q	L	X	Y	W	X	X	G	G	F	G	G	V	D	W	R	Q	S	W	L	X	L	A	L	.	I	P	V	L	L	W	I	C	C	Q	S	R	P	X	N	X	L	A	L	G	E	I	S	A	R	Q	L	G	L	P	L	W	F	W	R	N	V	L	V	A	A
Template Known Secondary structure																						T				T	T			G	G	G								.																											T	T
Template Predicted Secondary structure																																								.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		I	T	V	L	C	G	S	A	T	A	I	V	G	P	I	A	F	I	G	L	M	M	P	H	M	A	R	W	L	V	G	A	D	H	R	W	S	L	P	V	T	L	L	A	T	P	A	L	L	L	F	A	D	I	I	G	R	V	I	.	V	P	G	E	L	R	V	S	V	V	S	A	F	I	G	A	P	V	L	I
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		T	G	W	X	V	G	V	S	V	A	L	A	G	A	I	G	F	I	G	L	V	I	P	H	I	L	R	L	C	G	L	T	D	H	R	V	L	L	P	G	C	A	L	A	G	A	S	A	L	L	L	A	D	I	V	A	R	L	A	L	A	A	A	E	L	P	I	G	V	V	T	A	T	L	G	A	P	V	F	I
Template Known Secondary structure																		S	S	S	S									T	T			S																										S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		324	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	V	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	L	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions