 |
Job Description | P23876 | Confidence | 1.31% | Date | Thu Jan 5 11:40:14 GMT 2012 |
Rank | 55 | Aligned Residues | 28 |
% Identity | 14% | Template | c3ipdB_ |
PDB info |
PDB header:exocytosis | Chain: B: PDB Molecule:syntaxin-1a; |
PDBTitle: helical extension of the neuronal snare complex into the2 membrane, spacegroup i 21 21 21
|
Resolution | 4.80 Å |
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | T | R | A | I | A | V | P | G | L | L | L | L | L | I | I | A | T | A | L | S | L | L | I | G | A | K |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |
Template Sequence |   |
S | K | A | R | R | K | K | I | M | I | I | I | C | C | V | I | L | G | I | I | I | A | S | T | I | G | G | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S | S | S |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|