Job Description P23876 Confidence 100.00% Date Thu Jan 5 11:40:14 GMT 2012 Rank 2 Aligned Residues 304 % Identity 31% Template c2nq2A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:hypothetical abc transporter permease protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter. Resolution 2.40 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	V	P	G	L	L	L	L	L	I	I	A	T	A	L	S	L	L	I	G	A	K	S	L	P	A	S	V	V	L	E	A	F	S	G	T	C	Q	S	A	D	C	T	I	V	L	D	A	R	L	P	R	T	L	A	G	L	L	A	G	G	A	L	G	L	A	G	A	L	M	Q	T	L	T	R	N	P	L
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.
Template Sequence		P	K	I	L	F	G	L	T	L	L	L	V	I	T	A	V	I	S	L	G	I	G	R	Y	S	L	S	V	P	Q	I	.	.	.	.	.	.	.	.	D	P	V	Q	Q	Q	V	I	F	Q	V	R	L	P	R	I	L	T	A	L	C	V	G	A	G	L	A	L	S	G	V	V	L	Q	G	I	F	R	N	P	L
Template Known Secondary structure																				T	T	S	S	T	T			S	S				.	.	.	.	.	.	.	.											T																										T	T		T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	P	G	L	L	G	V	N	A	G	A	S	F	A	I	V	L	G	A	A	L	F	G	Y	S	S	A	Q	E	Q	L	A	M	A	F	A	G	A	L	V	A	S	L	I	V	A	F	T	G	S	Q	G	G	G	Q	L	S	P	V	R	L	T	L	A	G	V	A	L	A	A	V	L	E	G	L	T	S	G	I
Query Conservation
Alig confidence																										.	.																											.	.	.	.	.
Template Conservation																										.	.																											.	.	.	.	.
Template Sequence		V	N	P	H	I	I	G	V	T	S	G	S	A	F	G	G	T	L	A	I	F	F	G	F	.	.	S	L	Y	G	L	F	T	S	T	I	L	F	G	F	G	T	L	A	L	V	F	L	F	S	F	K	.	.	.	.	.	S	L	L	M	L	I	L	I	G	M	I	L	S	G	L	F	S	A	L	V	S	L	L
Template Known Secondary structure				T	T	T	T	S															T	T		.	.																									T		.	.	.	.	.
Template Predicted Secondary structure																										.	.																											.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		A	L	L	.	.	N	P	D	V	Y	D	Q	L	R	F	W	Q	A	G	S	L	D	I	R	N	L	H	T	L	K	V	V	L	I	P	V	L	I	A	G	A	T	A	L	L	L	S	R	A	L	N	S	L	S	L	G	S	D	T	A	T	A	L	G	S	R	V	A	R	T	Q	L	I	G	L	L	A	I	T	V
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		Q	Y	I	S	D	T	E	E	K	L	P	S	I	V	F	W	L	M	G	S	F	A	T	S	N	W	E	K	L	L	F	F	F	V	P	F	L	L	C	S	S	I	L	L	S	L	S	W	R	L	N	L	L	S	L	D	E	K	E	A	K	A	L	G	V	K	M	A	P	L	R	W	L	V	I	F	L	S	G	S
Template Known Secondary structure				S	S		T	T	T									T	T			S	T	T																							T	T	T	G	G	G	G	G	G	S								T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	G	S	A	T	A	I	V	G	P	I	A	F	I	G	L	M	M	P	H	M	A	R	W	L	V	G	A	D	H	R	W	S	L	P	V	T	L	L	A	T	P	A	L	L	L	F	A	D	I	I	G	R	V	I	V	P	G	E	L	R	V	S	V	V	S	A	F	I	G	A	P	V	L	I	F	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	A	C	Q	V	A	I	S	G	S	I	G	W	V	G	L	I	I	P	H	L	S	R	M	L	V	G	A	N	H	Q	S	L	L	P	C	T	M	L	V	G	A	T	Y	M	L	L	V	D	N	V	A	R	S	L	S	D	A	E	I	P	I	S	I	L	T	A	L	I	G	A	P	L	F	G	V	L	V	Y
Template Known Secondary structure															S	S	T	T												S																											S		S	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		328
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		329

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions