Job Description P23876 Confidence 56.01% Date Thu Jan 5 11:40:14 GMT 2012 Rank 3 Aligned Residues 169 % Identity 14% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	R	L	P	R	T	L	A	G	L	L	A	G	G	A	L	G	L	A	G	A	L	M	Q	T	L	T	R	N	P	L	A	D	P	G	L	L	G	V	N	A	G	A	S	F	A	I	V	L	G	A	A	L	F	G	Y	S	S	A	Q	E	Q	L	A	M	A	F	A	G	A	L	V	A	S	L	I	V	A	F
Query Conservation
Alig confidence																																.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		D	V	A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	.	.	.	.	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T	P	A	A	G	F	V	D	V	K	G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	M	D	F
Template Known Secondary structure																														S		.	.	.	.																		T	T	T	T	T	T
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		138		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure			.																																																									.	.
Query SS confidence			.																																																									.	.
Query Sequence		T	.	G	S	Q	G	G	G	Q	L	S	P	V	R	L	T	L	A	G	V	A	L	A	A	V	L	E	G	L	T	S	G	I	A	L	L	N	P	D	V	Y	D	Q	L	R	F	W	Q	A	G	S	L	D	I	R	N	L	H	.	.	T	L	K	V	V	L	I	P	V	L	I	A	G	A	T	A	L	L	L	S
Query Conservation			.																																																									.	.
Alig confidence			.																												.	.	.	.	.	.																								.	.
Template Conservation																															.	.	.	.	.	.
Template Sequence		R	I	K	K	K	I	D	E	S	L	D	A	W	A	I	H	G	I	G	G	L	W	G	S	V	A	V	G	I	.	.	.	.	.	.	L	A	N	P	E	V	N	G	Y	A	G	L	L	F	G	N	P	Q	L	L	V	S	Q	L	I	A	V	A	S	T	T	A	Y	A	F	L	V	T	L	I	L	A	K	A	V
Template Known Secondary structure					T	T				T	T																				.	.	.	.	.	.								S				G	G	G	T
Template Predicted Secondary structure																															.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.							.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	N	S	L	S	L	G	S	D	T	A	T	A	L	G	S	R	V	A	R	T
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		D	A	A	V	G	L	R	V	S	S	Q	.	E	E	Y	V	G	L	D	L	S	Q	H
Template Known Secondary structure					T		S	B					.
Template Predicted Secondary structure													.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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