Job Description P13029 Confidence 100.00% Date Thu Jan 5 11:33:28 GMT 2012 Rank 17 Aligned Residues 251 % Identity 18% Template c3q3uA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lignin peroxidase; PDBTitle: trametes cervina lignin peroxidase Resolution 1.85 Å

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		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.							.	.	.	.	.	490	.	.	.	.	.	.		.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.													.
Query SS confidence																																												.	.	.	.	.	.													.
Query Sequence		Y	N	P	T	E	Q	D	I	I	D	L	K	F	A	I	A	D	S	G	L	S	V	S	E	L	V	S	V	A	W	A	S	A	S	T	F	R	G	G	D	K	R	.	.	.	.	.	.	G	G	A	N	G	A	R	L	A	L	M	P	.	Q	R	D	W	D	V	N	A	A	A	V	R	A	L	P	V	L	E	K
Query Conservation																																												.	.	.	.	.	.													.
Alig confidence																																												.	.	.	.	.	.													.
Template Conservation
Template Sequence		W	F	P	V	L	D	D	I	Q	A	N	L	F	N	G	G	K	C	E	E	E	A	H	E	A	V	R	L	T	F	H	D	A	V	G	F	S	L	A	A	Q	K	A	G	K	F	G	G	G	G	A	D	G	S	I	L	A	F	S	D	I	E	T	A	F	I	P	N	F	G	L	E	F	T	T	E	G	F	I	P
Template Known Secondary structure													T	S	T	T	T			S															T	S								T	T	S					S	S	S	S					T					T	T	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540		.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		I	Q	K	E	S	G	K	A	S	L	A	D	I	I	V	L	A	G	V	V	G	V	E	K	A	.	A	S	A	A	G	L	S	I	H	V	P	F	A	P	G	R	V	D	A	R	Q	D	Q	T	D	I	E	M	F	E	L	L	E	P	I	A	D	G	F	R	N	Y	R	A	R	L	D	V	S	T	T	E	S	L
Query Conservation																											.
Alig confidence								.																			.				.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	L	A	H	G	.	V	S	F	G	D	F	V	Q	F	A	G	A	V	G	A	A	N	C	A	G	G	P	.	.	.	.	.	R	L	Q	F	L	A	G	R	S	N	I	S	Q	P	S	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	V	P	D	P	T	D	S	A	D	K
Template Known Secondary structure							T	.																	T	S	B	T			.	.	.	.	.										S							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S			T	T	S
Template Predicted Secondary structure								.																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																		.	.	.	.	.	.	.	.	150	.	.	.
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.			.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		L	I	D	K	A	Q	Q	L	T	L	T	A	P	E	M	T	A	L	V	G	G	M	R	V	L	G	A	N	F	D	.	.	G	S	K	N	G	V	F	T	D	R	V	G	V	L	S	N	D	F	F	V	N	L	L	D	M	R	Y	E	W	K	A	T	D	E	S	K	E	L	F	E	G	R	D	R	E	T	G	E
Query Conservation																																.	.
Alig confidence																																.	.																											.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		I	L	A	R	M	A	D	I	G	F	S	P	T	E	V	V	H	L	L	A	S	H	S	I	A	A	Q	Y	E	V	D	T	D	V	A	G	S	P	F	D	S	T	P	S	V	F	D	T	Q	F	F	V	E	S	L	L	H	G	.	.	.	.	.	.	T	Q	F	T	G	S	G	Q	G	G	E	V	M	S	P	I
Template Known Secondary structure								T	T	T										G	G	G	G	G	G				S	S	S		G	G	G	T	T			S	S	S		T	T	B		S	T							T	B			.	.	.	.	.	.		B		S	S		S		T	T				B	S	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		673	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	F	T	A	S	R	A	D	L	V	F	G	S	N	S	V	L	R	A	V	A	E	V	Y	A	S	S	D	A	H	E	K	F	V	K	D	F	V	A	A	W	V	K	V	M	N	L	D	R	F	D	L
Query Conservation
Alig confidence																																.	.																		.
Template Conservation																																.	.																		.
Template Sequence		P	G	E	F	R	L	Q	S	D	F	A	L	S	R	D	P	R	T	A	C	E	W	Q	A	L	V	N	N	Q	Q	.	.	A	M	V	N	N	F	E	A	V	M	S	R	L	A	V	I	G	.	Q	I	P
Template Known Secondary structure		T	T													S	T	T	T								T	T				.	.														T	T	T	T	.	S		G
Template Predicted Secondary structure																																.	.																		.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions