Job Description P13029 Confidence 61.63% Date Thu Jan 5 11:33:28 GMT 2012 Rank 36 Aligned Residues 84 % Identity 20% Template c3ketA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	A	R	R	L	L	W	P	I	K	Q	K	Y	G	Q	K	I	S	W	A	D	L	F	I	L	A	G	N	V	A	L	E	N	S	G	F	R	T	F	G	F	G	A	G	R	E	D	V	W	E	P	D	L	D	V	N	W	G	D	E	K	A	W	L	T	H	R	H	P	E	A	L	A	K	A	P	L	G
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	L	Y	Y	R	I	F	K	R	F	N	T	D	G	I	E	K	A	S	S	K	Q	I	A	D	A	L	G	I	D	S	A	T	V	.	.	.	.	.	.	.	.	.	.	.	R	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T														T	S						.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.												50	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		A	T	E	M	G	L	I	Y	V	N	P	E	G	P	D	H	S	G	E	P	L	S	A	A	A	A	I	R	A	T	F	G	N	.	M	G	M	N	D	E	E	T	V	A	L	I	A	G	G	H	T	L	G	K	T	H
Query Conservation																																			.
Alig confidence		.	.	.	.	.					.	.	.																						.													.
Template Conservation		.	.	.	.	.					.	.	.																																			.
Template Sequence		.	.	.	.	.	F	S	Y	F	.	.	.	G	E	L	G	R	R	G	F	G	Y	D	V	K	K	L	M	N	F	F	A	E	I	L	N	D	H	S	T	T	N	V	M	L	V	.	G	C	G	N	I	G	R	A	L
Template Known Secondary structure		.	.	.	.	.			T	T	.	.	.				S	B	T	T	T	B														T	T		S	S								.			S
Template Predicted Secondary structure		.	.	.	.	.					.	.	.																																			.
Template SS confidence
							53	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions