Job Description P13029 Confidence 100.00% Date Thu Jan 5 11:33:28 GMT 2012 Rank 32 Aligned Residues 245 % Identity 18% Template c3hdlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:royal palm tree peroxidase; PDBTitle: crystal structure of highly glycosylated peroxidase from royal palm2 tree Resolution 1.85 Å

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		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.							.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.
Query Sequence		N	P	T	E	Q	D	I	I	D	L	K	F	A	I	A	D	S	G	L	S	V	S	E	L	V	S	V	A	W	A	S	A	S	T	F	R	G	G	D	K	R	G	G	A	N	G	A	R	L	A	L	M	P	.	.	.	.	.	.	Q	R	D	W	D	V	N	A	A	A	V	R	A	L	P	V	L	E	K	I	Q
Query Conservation																																																							.	.	.	.	.	.
Alig confidence																		.	.	.																.	.	.	.	.	.	.													.	.	.	.	.	.											.
Template Conservation																		.	.	.																.	.	.	.	.	.	.																													.
Template Sequence		S	L	V	Q	Q	A	V	A	A	A	F	A	N	N	S	G	.	.	.	I	A	P	G	L	I	R	M	H	F	H	D	C	F	V	.	.	.	.	.	.	.	R	G	C	D	A	S	V	L	L	D	S	T	A	N	N	T	A	E	K	D	A	I	P	N	N	P	S	L	.	R	G	F	E	V	I	T	A	A	K
Template Known Secondary structure																T	T	.	.	.														T	T	.	.	.	.	.	.	.	T	S	S	S	S	G	G	G				B	T	T	B			G	G	G	S	T	T	T	T	T	T		.
Template Predicted Secondary structure																		.	.	.																.	.	.	.	.	.	.																													.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.								.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.
		518	.	520						.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		K	E	S	.	.	.	.	.	G	K	A	S	L	A	D	I	I	V	L	A	G	V	V	G	V	E	K	A	A	S	A	A	G	L	S	I	H	V	P	F	A	P	G	R	V	D	A	R	Q	D	Q	T	D	I	E	M	F	E	L	L	E	P	I	A	D	G	F	R	N	Y	R	A	R	L	D	V	S	T	T	E
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.																								.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	V	E	A	A	C	P	Q	T	V	S	C	A	D	I	L	A	F	A	A	R	D	S	A	N	L	A	G	N	I	.	.	.	.	.	T	Y	Q	V	P	S	G	R	R	D	G	T	V	S	L	A	S	E	A	N	A	Q	I	P	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	N	A
Template Known Secondary structure								S	T	T	T	S																					.	.	.	.	.										B		S											S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.						.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.															.	.	.	.
		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.							.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650										.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		S	L	L	I	D	K	A	Q	Q	L	T	L	T	A	P	E	M	T	A	L	V	G	G	M	R	V	L	G	A	N	F	D	G	.	.	.	.	.	.	S	K	N	G	V	F	T	D	R	V	G	V	L	S	N	D	F	F	V	N	L	L	D	M	R	.	.	.	.	.	.	.	.	.	Y	E	W	K	A	T	D
Query Conservation																																			.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.												.														.	.	.	.	.	.	.	.	.
Template Conservation																																																				.
Template Sequence		T	Q	L	I	N	S	F	A	N	K	T	L	T	A	D	E	M	V	T	L	S	G	A	H	S	I	G	V	A	H	C	S	S	F	T	N	R	L	Y	N	F	N	S	G	S	G	I	D	P	T	.	L	S	P	S	Y	A	A	L	L	R	N	T	C	P	A	N	S	T	R	F	T	P	I	T	V	S	L	D	I
Template Known Secondary structure										T	T	T										G	G	G	G	G	S	S				G	G	G	T	G	G	G	T	S	S		S	S	S	S	S	S		T	T	.	S												S		T	T			T	T	S						S		S
Template Predicted Secondary structure																																																				.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		658	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	K	E	L	F	E	G	R	D	R	E	T	G	E	V	K	F	T	A	S	R	A	D	L	V	F	G	S	N	S	V	L	R	A	V	A	E	V	Y	A	S	S	D	A	H	E	K	F	V	K	D	F	V	A	A	W	V	K	V	M	N	L	D
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		I	T	P	S	V	L	D	N	M	Y	Y	T	G	V	Q	L	T	L	G	L	L	T	S	D	Q	A	L	V	T	E	A	N	L	S	A	A	V	K	A	N	A	M	N	L	T	.	.	A	W	A	S	K	F	A	Q	A	M	V	K	M	G	Q	I	E
Template Known Secondary structure		S	S	T	T	S		S	T								T	T				S					G	G	G	S	S																.	.														T	T	T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions