Job Description P13029 Confidence 100.00% Date Thu Jan 5 11:33:28 GMT 2012 Rank 1 Aligned Residues 696 % Identity 55% Template c1itkB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:catalase-peroxidase; PDBTitle: crystal structure of catalase-peroxidase from haloarcula2 marismortui Resolution 2.00 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	T	T	R	D	W	W	P	N	Q	L	R	V	D	L	L	N	Q	H	S	N	R	S	N	P	L	G	E	D	F	D	Y	R	K	E	F	S	K	L	D	Y	Y	G	L	K	K	D	L	K	A	L	L	T	E	S	Q	P	W	W	P	A	D	W	G	S	Y	A	G	L	F	I	R	M	A	W	H	G	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	S	N	Q	D	W	W	P	S	K	L	N	L	E	I	L	D	Q	N	A	R	D	V	G	P	V	E	D	D	F	D	Y	A	E	E	F	Q	K	L	D	L	E	A	V	K	S	D	L	E	E	L	M	T	S	S	Q	D	W	W	P	A	D	Y	G	H	Y	G	P	L	F	I	R	M	A	W	H	S	A	G
Template Known Secondary structure										T	T	S			T					T	T	S				S	S			T	T										S														T			B	T	T	B			G	G	G															T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	R	S	I	D	G	R	G	G	A	G	R	G	Q	Q	R	F	A	P	L	N	S	W	P	D	N	V	S	L	D	K	A	R	R	L	L	W	P	I	K	Q	K	Y	G	Q	K	I	S	W	A	D	L	F	I	L	A	G	N	V	A	L	E	N	S	G	F	R	T	F	G	F	G	A	G	R	E	D	V	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	R	T	A	D	G	R	G	G	A	A	G	G	R	Q	R	F	A	P	I	N	S	W	P	D	N	A	N	L	D	K	A	R	R	L	L	L	P	I	K	Q	K	Y	G	Q	K	I	S	W	A	D	L	M	I	L	A	G	N	V	A	I	E	S	M	G	F	K	T	F	G	Y	A	G	G	R	E	D	A	F
Template Known Secondary structure		T			T	T	T			S	S	S	T	T		G	G	G	S	T	T	G	G	G		G	G	G	T	T								T								G	G	G	S																	T	T				S				B						S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		E	P	D	L	D	V	N	W	G	D	E	K	A	W	L	.	.	T	H	R	H	P	E	A	L	A	K	A	P	L	G	A	T	E	M	G	L	I	Y	V	N	P	E	G	P	D	H	S	G	E	P	L	S	A	A	A	A	I	R	A	T	F	G	N	M	G	M	N	D	E	E	T	V	A	L	I	A	G	G	H
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		E	E	D	K	A	V	N	W	G	P	E	D	E	F	E	T	Q	E	R	F	D	E	P	G	E	I	Q	E	G	L	G	A	S	V	M	G	L	I	Y	V	N	P	E	G	P	D	G	N	P	D	P	E	A	S	A	K	N	I	R	Q	T	F	D	R	M	A	M	N	D	K	E	T	A	A	L	I	A	G	G	H
Template Known Secondary structure		S			T	T					S		S	S	T	T				S		S	S	T	T				T	T		S		S	S	T	T		S	S	S		T	T		G	G	G																	T	T	T														T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		T	L	G	K	T	H	G	A	.	G	P	T	S	N	V	G	P	D	P	E	A	A	P	I	E	E	Q	G	L	G	W	A	S	T	Y	G	S	G	V	G	A	D	A	I	T	S	G	L	E	V	V	W	T	Q	T	P	T	Q	W	S	N	Y	F	F	E	N	L	F	K	Y	E	W	V	Q	T	R	S	P	A	G
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		T	F	G	K	V	H	G	A	D	D	P	E	E	N	L	G	P	E	P	E	A	A	P	I	E	Q	Q	G	L	G	W	Q	N	K	N	G	N	S	K	G	G	E	M	I	T	S	G	I	E	G	P	W	T	Q	S	P	T	E	W	D	M	G	Y	I	N	N	L	L	D	Y	E	W	E	P	E	K	G	P	G	G
Template Known Secondary structure		T	S					B	S	S						B				G	G	G	S		G	G	G	T	T					B	T	T		T	T		G	G	G		B	S	S	S					S	S	S	S	T	T	S		S	S									S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		A	I	Q	F	E	A	V	D	A	.	.	P	E	I	I	P	D	P	F	D	P	S	K	K	R	K	P	T	M	L	V	T	D	L	T	L	R	F	D	P	E	F	E	K	I	S	R	R	F	L	N	D	P	Q	A	F	N	E	A	F	A	R	A	W	F	K	L	T	H	R	D	M	G	P	K	S	R	Y	I	G
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		A	W	Q	W	A	P	K	S	E	E	L	K	N	S	V	P	D	A	H	D	P	D	E	K	Q	T	P	M	M	L	T	T	D	I	A	L	K	R	D	P	D	Y	R	E	V	M	E	T	F	Q	E	N	P	M	E	F	G	M	N	F	A	K	A	W	Y	K	L	T	H	R	D	M	G	P	P	E	R	F	L	G
Template Known Secondary structure								S	S	S	T	T	T	T					S	S		T	T							B										S																															T	T	S		S	G	G	G		B	S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		P	E	V	P	K	E	D	L	I	W	Q	D	P	L	P	Q	P	I	Y	N	P	T	E	.	Q	D	I	I	D	L	K	F	A	I	A	D	S	G	L	S	V	S	E	L	V	S	V	A	W	A	S	A	S	T	F	R	G	G	D	K	R	G	G	A	N	G	A	R	L	A	L	M	P	Q	R	D	W	D	V	N
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		P	E	V	P	D	E	E	M	I	W	Q	D	P	L	P	D	A	D	Y	D	L	I	G	D	E	E	I	A	E	L	K	E	E	I	L	D	S	D	L	S	V	S	Q	L	V	K	T	A	W	A	S	A	S	T	Y	R	D	S	D	K	R	G	G	A	N	G	A	R	L	R	L	E	P	Q	K	N	W	E	V	N
Template Known Secondary structure		T	T	S		S	S			G	G	G								S	B																	S	S															T	T		B	T	T	T	T	B			S	T	B		G	G	G	S	T	T	G	G	G		G	G	G
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
				504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520								.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure		.	.																		.	.	.	.	.	.	.
Query SS confidence		.	.																		.	.	.	.	.	.	.
Query Sequence		.	.	A	A	A	V	R	A	L	P	V	L	E	K	I	Q	K	E	S	.	.	.	.	.	.	.	G	K	A	S	L	A	D	I	I	V	L	A	G	V	V	G	V	E	K	A	A	S	A	A	G	L	S	I	H	V	P	F	A	P	G	R	V	D	A	R	Q	D	Q	T	D	I	E	M	F	E	L	L	E	P
Query Conservation		.	.																		.	.	.	.	.	.	.
Alig confidence		.	.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	E	Q	L	E	T	V	L	G	T	L	E	N	I	Q	T	E	F	N	D	S	R	S	D	G	T	Q	V	S	L	A	D	L	I	V	L	G	G	N	A	A	V	E	Q	A	A	A	N	A	G	Y	D	V	E	I	P	F	E	P	G	R	V	D	A	G	P	E	H	T	D	A	P	S	F	D	A	L	K	P
Template Known Secondary structure																									S	S	S	B																							T	T													B			G	G	G			G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	D	G	F	R	N	Y	R	A	R	L	D	V	S	T	T	E	S	L	L	I	D	K	A	Q	Q	L	T	L	T	A	P	E	M	T	A	L	V	G	G	M	R	V	L	G	A	N	F	D	G	S	K	N	G	V	F	T	D	R	V	G	V	L	S	N	D	F	F	V	N	L	L	D	M	R	Y	E	W	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	D	G	V	R	N	Y	I	Q	D	D	I	T	R	P	A	E	E	V	L	V	D	N	A	D	L	L	N	L	T	A	S	E	L	T	A	L	I	G	G	M	R	S	I	G	A	N	Y	Q	D	T	D	L	G	V	F	T	D	E	P	E	T	L	T	N	D	F	F	V	N	L	L	D	M	G	T	E	W	E
Template Known Secondary structure		S			T	T	T	T				T	T		S	S													T	T																				G	G	G			T	T				S	S	T	T	S		S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.
		655	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	D	E	S	K	E	L	F	E	G	R	D	R	E	T	G	E	V	K	F	T	A	S	R	A	D	L	V	F	G	S	N	S	V	L	R	A	V	A	E	V	Y	A	S	S	D	A	H	E	K	F	V	K	D	F	V	A	A	W	V	K	V	M	N	L	D	R	F	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	A	D	S	E	H	R	Y	K	G	L	D	R	D	T	G	E	V	K	W	E	A	T	R	I	D	L	I	F	G	S	N	D	R	L	R	A	I	S	E	V	Y	G	S	A	D	A	E	K	K	L	V	H	D	F	V	D	T	W	S	K	V	M	K	L	D	R	F	D	L
Template Known Secondary structure				T	T		S	S							T	T	T																	S											T	S	T	T																		T	T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730