Job Description P08178 Confidence 100.00% Date Thu Jan 5 11:00:42 GMT 2012 Rank 4 Aligned Residues 294 % Identity 25% Template c3mdoB_ PDB info PDB header:ligase Chain: B: PDB Molecule:putative phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of a putative phosphoribosylformylglycinamidine2 cyclo-ligase (bdi_2101) from parabacteroides distasonis atcc 8503 at3 1.91 a resolution Resolution 1.91 Å

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		45	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure										.																								.	.	.	.	.	.	.																										.
Query SS confidence										.																								.	.	.	.	.	.	.																										.
Query Sequence		F	G	A	L	C	A	L	P	.	Q	K	Y	R	E	P	V	L	V	S	G	T	D	G	V	G	T	K	L	R	L	A	M	.	.	.	.	.	.	.	D	L	K	R	H	D	T	I	G	I	D	L	V	A	M	C	V	N	D	L	V	V	Q	G	A	.	E	P	L	F	F	L	D	Y	Y	A	T	G	K	L	D
Query Conservation										.																								.	.	.	.	.	.	.																										.
Alig confidence										.																								.	.	.	.	.	.	.																										.
Template Conservation
Template Sequence		F	C	K	I	I	P	D	I	L	G	G	D	P	E	Y	C	N	I	X	H	A	D	G	A	G	T	K	S	S	L	A	Y	X	Y	W	K	E	T	G	D	L	S	V	W	K	G	I	A	Q	D	A	L	I	X	N	I	D	D	L	L	C	V	G	A	V	D	N	I	L	V	S	S	T	I	G	R	N	K	L	L
Template Known Secondary structure		S	S						T	T	T			T	T											T	T															T	T																			T	T	T			S	S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
								116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																	.
Query SS confidence		.	.	.	.	.	.																	.
Query Sequence		.	.	.	.	.	.	V	D	T	A	S	A	V	I	S	G	I	A	E	G	C	L	.	Q	S	G	C	S	L	V	G	G	E	T	A	E	M	P	G	M	Y	H	G	E	D	Y	D	V	A	G	F	C	V	G	V	V	E	K	S	E	I	I	D	G	S	K	V	S	D	G	D	V	L	I	A	L	G	S	S	G
Query Conservation		.	.	.	.	.	.																	.
Alig confidence		.	.	.	.	.	.																	.																			.	.
Template Conservation																																											.	.
Template Sequence		V	P	G	E	V	I	S	A	I	I	N	G	T	D	E	L	L	A	E	L	R	E	X	G	V	G	C	Y	A	T	G	G	E	T	A	D	V	G	D	L	V	.	.	R	T	I	I	V	D	S	T	V	T	C	R	X	K	R	S	D	V	I	D	N	K	N	I	Q	G	G	D	V	I	V	G	L	A	S	S	G
Template Known Secondary structure		S																						T	T														T	T	T		.	.	S	S													G	G	G				G	G	G			T	T								S	S	B
Template Predicted Secondary structure																																											.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		189	190												.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																								.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	H	.	.	.	.	.	.	.	.	.	.	.	S	N	G	Y	S	L	V	R	K	I	L	E	V	S	G	C	D	P	Q	T	T	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	K	P	L	A	D	H	L	L	A	P	T	R	I	Y	V	K	S	V	L
Query Conservation				.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	T	Y	E	K	E	Y	N	G	G	X	G	S	N	G	L	T	S	A	R	H	D	V	F	S	K	Y	L	A	K	K	Y	P	E	S	Y	D	A	A	V	P	K	E	L	V	Y	S	G	G	L	K	L	T	D	K	I	E	E	L	G	I	D	A	G	K	X	V	L	S	P	T	R	T	Y	A	P	V	I	K
Template Known Secondary structure				T	T		S	S		B					S	S	S							T	T	B		T							G	G	G	S		T	T	S		G	G	G	S	S		S	S	B		T	T				T	T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		235	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		E	L	I	E	.	.	K	V	D	V	H	A	I	A	H	L	T	G	G	G	F	W	E	N	I	P	R	V	L	P	D	N	T	Q	A	V	I	D	E	S	S	W	Q	W	P	E	V	F	N	W	L	Q	T	A	G	N	V	E	H	H	E	M	Y	R	T	F	N	C	G	V	G	M	I	I	A	L	P	A	P	E
Query Conservation						.	.
Alig confidence						.	.																.										.	.
Template Conservation																							.										.	.
Template Sequence		V	L	L	D	K	L	R	S	Q	I	H	G	X	V	H	C	S	G	G	A	Q	.	T	K	V	X	H	F	V	E	N	.	.	K	R	V	T	K	D	N	L	F	P	I	P	P	L	F	R	T	I	Q	E	Q	S	G	T	D	W	S	E	X	Y	K	V	F	N	X	G	H	R	X	E	I	Y	I	A	P	E	H
Template Known Secondary structure								G	G	G									S	S	G	G	.	G	G	G	G	G	T		S	S	.	.							S																										S		T	T									G	G	G
Template Predicted Secondary structure																							.										.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	K	A	L	A	L	L	N	A	N	G	E	N	A	W	K	I	G	I	I	K	A	S	D	S	E	Q	R	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	E	V	I	G	I	S	K	S	F	G	I	D	A	Q	I	V	G	F	V	E	E	A	D	K	N	E	L	I	I
Template Known Secondary structure											T	T	T													S	S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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