Job Description P08178 Confidence 100.00% Date Thu Jan 5 11:00:42 GMT 2012 Rank 10 Aligned Residues 286 % Identity 17% Template c3mcqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thiamine-monophosphate kinase; PDBTitle: crystal structure of thiamine-monophosphate kinase (mfla_0573) from2 methylobacillus flagellatus kt at 1.91 a resolution Resolution 1.91 Å

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		29	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		V	V	K	K	T	R	R	.	.	.	P	E	V	M	G	G	L	G	G	F	G	A	L	C	A	L	P	Q	K	Y	R	E	P	V	L	V	S	G	T	D	G	V	G	T	K	L	R	L	A	M	D	L	K	R	H	D	T	I	G	I	D	L	V	A	M	C	V	N	D	L	V	V	Q	G	A	E	P	L	F	F
Query Conservation									.	.	.
Alig confidence									.	.	.																						.	.	.																				.
Template Conservation																																	.	.	.																				.
Template Sequence		L	I	Q	R	Y	F	R	R	A	H	P	S	A	V	L	G	V	G	D	D	A	A	L	I	Q	P	S	P	G	X	E	.	.	.	L	A	V	S	A	D	X	L	V	A	N	T	H	F	Y	P	N	I	D	.	P	W	L	I	G	W	K	S	L	A	V	N	I	S	D	X	A	A	X	G	A	Q	P	R	W	A
Template Known Secondary structure						S								T	T	T				G	G	G	G						T	T			.	.	.												T	T	S				S		.																			T	T
Template Predicted Secondary structure																																	.	.	.																				.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	Y	Y	A	T	G	K	L	D	V	D	T	A	S	A	V	I	S	G	I	A	E	G	C	L	Q	S	G	C	S	L	V	G	G	E	T	A	E	M	P	G	M	Y	H	G	E	D	Y	D	V	A	G	F	C	V	G	V	V	E	K	S	E	I	I	D	G	S	K	V	S	D	G	D	V	L	I	A	L	G
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		T	L	T	I	A	L	P	E	A	D	E	D	W	I	S	K	F	A	A	G	F	F	A	C	A	A	Q	F	D	I	A	L	I	G	G	D	T	T	R	G	P	.	.	.	.	.	.	.	L	T	I	S	V	Q	I	X	G	E	T	P	P	G	A	S	L	L	R	S	T	A	R	A	D	D	D	I	W	V	S	G
Template Known Secondary structure								S	S																				T	T											S	S	.	.	.	.	.	.	.													T	T					S	S				T	T							S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		S	S	G	P	H	S	N	G	Y	S	L	V	R	K	I	L	E	V	S	G	C	D	P	Q	T	T	E	L	D	G	K	P	L	A	D	H	L	L	A	P	T	R	I	Y	V	K	S	V	L	E	L	I	E	K	V	D	V	H	A	I	A	H	L	T	G	G	G	F	W	E	N	I	P	R	V	L	P	.	D	N
Query Conservation																																																																															.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																																.													.
Template Conservation																									.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		P	L	G	D	A	A	L	A	L	A	A	I	Q	G	R	Y	P	L	S	D	T	E	L	.	.	.	.	.	.	.	.	.	.	A	A	C	G	K	A	L	H	Q	P	Q	P	R	V	V	L	G	Q	A	L	R	G	L	A	H	S	A	L	D	I	S	.	D	G	L	L	A	D	L	G	H	I	L	E	H	S	Q
Template Known Secondary structure				S										T	T	S	S								.	.	.	.	.	.	.	.	.	.																				T	T	T	T								S	.	S														T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.											.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	A	V	I	D	E	S	S	W	Q	W	P	E	V	F	N	W	L	Q	T	A	G	N	V	E	H	H	E	M	Y	R	T	F	N	C	G	V	G	M	I	I	A	L	P	A	P	E	V	D	K	A	L	A	L	L	N	A	N	G	E	N	A	W	K	I	G	I	I	K	A	S	D	S
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		V	G	A	E	V	W	L	K	A	I	P	K	S	E	V	V	S	A	H	S	Q	E	V	A	.	.	I	Q	K	X	I	L	S	G	G	D	D	Y	E	L	C	F	T	A	S	T	Q	H	R	Q	Q	I	A	D	I	G	R	Q	L	S	L	D	X	A	V	I	G	R	I	T	D	T	Q	Q
Template Known Secondary structure								G	G	G	S									T	T	T	S			.	.									S											G	G	G											T	T											S	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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