Job Description P08178 Confidence 100.00% Date Thu Jan 5 11:00:42 GMT 2012 Rank 6 Aligned Residues 291 % Identity 25% Template c3kizA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of putative phosphoribosylformylglycinamidine cyclo-2 ligase (yp_676759.1) from cytophaga hutchinsonii atcc 33406 at 1.50 a3 resolution Resolution 1.50 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.
Query Sequence		A	L	P	Q	K	Y	R	E	P	V	L	V	S	G	T	D	G	V	G	T	K	L	R	L	A	M	D	L	K	R	.	.	.	.	.	.	.	H	D	T	I	G	I	D	L	V	A	M	C	V	N	D	L	V	V	Q	G	A	E	P	L	F	F	L	D	Y	Y	A	T	G	K	L	D	V	D	T	A	S	A	V
Query Conservation																																.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.																														.
Template Conservation																																																																				.
Template Sequence		D	I	L	G	G	D	P	E	Y	C	N	I	X	H	A	D	G	A	G	T	K	S	S	L	A	Y	V	Y	W	K	E	T	G	D	I	S	V	W	K	G	I	A	Q	D	A	V	I	X	N	I	D	D	L	I	C	V	G	A	V	D	N	I	L	L	S	S	.	T	I	G	R	N	K	N	L	I	P	G	E	V
Template Known Secondary structure			T	T	T			T	T											T	T															T																			G	G	G	T			S	S						.						T	T	T	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.										.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Query Sequence		I	S	G	I	A	E	G	C	L	Q	.	.	.	.	.	.	.	.	.	S	G	C	S	L	V	G	G	E	T	A	E	M	P	G	M	Y	H	G	E	D	Y	D	V	A	G	F	C	V	G	V	V	E	K	S	E	I	I	D	G	S	K	V	S	D	G	D	V	L	I	A	L	G	S	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																								.	.																														.	.	.	.	.	.	.
Template Conservation																																												.	.
Template Sequence		L	A	A	I	I	N	G	T	E	E	V	L	Q	X	L	R	D	N	G	I	G	I	Y	S	T	G	G	E	T	A	D	V	G	D	L	V	R	T	I	I	V	D	.	.	S	T	V	T	C	R	X	K	R	Q	D	V	I	S	N	E	N	I	K	A	G	N	V	I	V	G	F	A	S	Y	G	Q	T	S	Y	E
Template Known Secondary structure																			T	T														T	T	T		S	S					.	.									G	G	G				G	G	G			T	T								S	S	B			T	T
Template Predicted Secondary structure																																												.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
						187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																								.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query SS confidence		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query Sequence		.	.	.	.	S	G	P	H	S	N	G	Y	S	L	V	R	K	I	L	E	V	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	P	Q	T	T	E	L	D	G	K	P	L	A	D	H	L	L	A	P	T	R	I	Y	V	K	S	V	L	E	L	I	E	.
Query Conservation		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Alig confidence		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation
Template Sequence		T	E	Y	N	G	G	X	G	S	N	G	L	T	S	A	R	H	D	V	F	N	N	V	L	A	S	K	Y	P	E	S	F	D	P	K	V	P	E	N	L	V	Y	S	G	E	X	N	L	T	D	P	Y	L	N	V	P	L	D	A	G	K	L	V	L	S	P	T	R	T	Y	A	P	L	X	K	E	I	I	H	Q
Template Known Secondary structure		S	S		B				T	T	S	S									B		T							G	G	G	S		T	T	S		G	G	G	S	S		S	S	B		T	T				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
			239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	K	V	D	V	H	A	I	A	H	L	T	G	G	G	F	W	E	N	I	P	R	V	L	P	D	N	T	Q	A	V	I	D	E	S	S	W	Q	W	P	E	V	F	N	W	L	Q	T	A	G	N	V	E	H	H	E	M	Y	R	T	F	N	C	G	V	G	M	I	I	A	L	P	A	P	E	V	D	K	A	L
Query Conservation		.
Alig confidence		.																						.	.
Template Conservation																								.	.
Template Sequence		Y	K	G	K	L	D	G	V	V	H	C	S	G	G	G	Q	T	K	V	L	H	F	.	.	T	D	A	T	T	H	I	I	K	D	N	L	F	D	V	P	P	L	F	Q	L	I	Q	G	Q	S	N	T	P	W	E	E	X	Y	K	V	F	N	X	G	H	R	L	E	I	Y	T	D	A	A	H	A	E	G	X	I
Template Known Secondary structure		S	T	T			S							T	T	G	G	G	G	G	G	G	G	.	.			T	T							S																T										S		T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	N	A	N	G	E	N	A	W	K	I	G	I	I	K	A	S	D	S	E	Q	R	V	V	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	A	K	K	F	N	I	E	A	K	I	I	G	R	V	E	A	P	V	A	G	K	R	L	T	I	T
Template Known Secondary structure							T	T											S		B	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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