Job Description P08178 Confidence 100.00% Date Thu Jan 5 11:00:42 GMT 2012 Rank 8 Aligned Residues 304 % Identity 17% Template c3fd5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:selenide, water dikinase 1; PDBTitle: crystal structure of human selenophosphate synthetase 12 complex with ampcp Resolution 1.90 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	I	K	G	V	V	K	K	T	R	R	P	E	V	M	G	G	L	G	G	F	G	A	L	C	A	L	P	Q	K	Y	R	E	P	V	L	V	S	G	T	D	G	V	G	T	K	L	R	L	A	M	D	L	K	R	H	D	T	I	G	I	D	L	V	A	M	C	V	N	D	L	V	V	Q	G	A	E	P	L
Query Conservation
Alig confidence																	.	.															.	.										.	.	.	.	.	.
Template Conservation																	.	.															.	.										.	.	.	.	.	.
Template Sequence		D	V	L	Q	K	L	L	E	S	L	V	M	P	R	L	.	.	G	I	G	M	D	T	C	V	I	P	L	R	H	G	.	.	G	L	S	L	V	Q	T	T	D	.	.	.	.	.	.	Y	I	Y	P	I	V	D	D	P	Y	M	M	G	R	I	A	C	A	N	V	L	S	D	L	Y	A	M	G	V	T	E	C
Template Known Secondary structure								T	T	T						B	.	.		T	T	S	S	S						S	S	T	.	.	T									.	.	.	.	.	.						S	S																			T	T	T
Template Predicted Secondary structure																	.	.															.	.										.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		104	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		F	F	L	D	Y	Y	.	.	.	.	.	.	A	T	G	K	L	D	V	D	T	A	S	A	V	I	S	G	I	A	E	G	C	L	Q	S	G	C	S	L	V	G	G	E	T	A	E	M	P	G	M	Y	H	G	E	D	Y	D	V	A	G	F	C	V	G	V	V	E	K	S	E	I	I	D	G	S	K	V	S	D
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																																									.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		D	N	M	L	M	L	L	G	V	S	N	K	M	T	D	R	E	R	D	K	V	M	P	L	I	I	Q	G	F	K	D	A	A	E	E	A	G	T	S	V	T	G	G	Q	T	V	L	N	P	W	I	V	.	.	.	.	.	.	L	G	G	V	A	T	T	V	C	Q	P	N	E	F	I	M	P	D	N	A	V	P
Template Known Secondary structure		S										T	T	S																							T	T												S	S			.	.	.	.	.	.											G	G	G	S			T	T				T
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		178	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		G	D	V	L	I	A	L	G	S	S	G	.	.	P	H	S	N	G	Y	S	L	V	R	K	I	L	E	V	S	G	C	D	P	Q	T	T	E	L	D	G	K	P	L	A	D	H	L	L	A	P	T	R	I	Y	V	K	S	V	L	E	L	I	E	K	V	D	V	H	A	I	A	H	L	T	G	G	G	F	W	E
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		G	D	V	L	V	L	T	K	P	L	G	T	Q	V	A	V	A	V	H	Q	W	L	D	I	P	E	K	W	N	K	I	K	L	V	V	T	Q	E	D	V	E	L	A	Y	Q	E	A	M	M	N	M	A	R	L	N	R	T	A	A	G	L	M	H	T	F	N	A	H	A	A	T	D	I	T	G	F	G	I	L	G
Template Known Secondary structure		T							S		B												T	T									T	T	T																			S		S										T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		256	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.
Predicted Secondary structure									.																																	.																														.
Query SS confidence									.																																	.																														.
Query Sequence		N	I	P	R	V	L	P	.	D	N	T	Q	A	V	I	D	E	S	S	W	Q	W	P	E	V	F	N	W	L	Q	T	A	G	N	V	E	H	H	E	M	.	Y	R	T	F	N	C	G	V	G	M	I	I	A	L	P	A	P	E	V	D	K	A	L	A	L	L	N	A	N	.	G	E	N	A	W	K	I	G	I
Query Conservation									.																																	.																														.
Alig confidence									.																																	.																														.
Template Conservation
Template Sequence		H	A	Q	N	L	A	K	Q	Q	R	N	E	V	S	F	V	I	H	N	L	P	V	L	A	K	M	A	A	V	S	K	A	C	G	N	M	F	G	L	M	H	G	T	C	P	E	T	S	G	G	L	L	I	C	L	P	R	E	Q	A	A	R	F	C	A	E	I	K	S	P	E	G	H	Q	A	W	I	I	G	I
Template Known Secondary structure									T		S	S	S												T	T								T	T	T	S	S		T	T	T	T		S			S	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		333	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	A	S	D	S	E	Q	R	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	K	G	N	R	T	A	R	I	I
Template Known Secondary structure					S	S	S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions