Job Description P08178 Confidence 100.00% Date Thu Jan 5 11:00:42 GMT 2012 Rank 11 Aligned Residues 291 % Identity 21% Template c2z1tA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydrogenase expression/formation protein hype; PDBTitle: crystal structure of hydrogenase maturation protein hype Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	G	V	V	K	K	T	R	R	P	E	V	M	G	G	L	G	G	F	G	A	L	C	A	L	P	Q	K	Y	R	E	P	V	L	V	S	G	T	D	G	V	G	T	K	L	R	L	A	M	D	L	K	R	H	D	T	I	G	I	D	L	V	A	M	C	V	N	D	L	V	V	Q	G	A	E	P	L	F	F
Query Conservation
Alig confidence																.															.	.	.	.	.									.	.	.	.
Template Conservation																.															.	.	.	.	.									.	.	.	.
Template Sequence		I	S	D	L	F	L	R	H	F	D	N	P	I	L	.	G	T	L	N	D	A	A	R	L	D	L	T	G	P	.	.	.	.	.	L	A	M	S	T	D	S	Y	.	.	.	.	T	V	D	P	I	F	F	P	G	G	D	I	G	T	L	A	V	H	G	T	V	N	D	V	S	M	L	G	A	R	P	R	Y	L
Template Known Secondary structure													T	T	T	.	T	T			S	S							S	S	.	.	.	.	.									.	.	.	.			S	S	S			T	T																	T	T	T
Template Predicted Secondary structure																.															.	.	.	.	.									.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		106	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	D	Y	Y	A	T	G	K	L	.	D	V	D	T	A	S	A	V	I	S	G	I	A	E	G	C	L	Q	S	G	C	S	L	V	G	G	E	T	A	E	M	P	G	M	Y	H	G	E	D	Y	D	V	A	G	F	C	V	G	V	V	E	K	S	E	I	I	D	G	S	K	V	S	D	G	D	V	L	I	A	L
Query Conservation											.
Alig confidence											.																																			.
Template Conservation																																														.
Template Sequence		S	C	G	F	I	L	E	E	G	L	D	M	D	I	L	E	R	V	V	A	S	M	G	K	A	A	R	E	A	G	V	F	I	V	T	G	D	T	K	V	V	P	R	G	.	A	C	D	K	M	F	I	N	T	T	G	I	G	E	I	L	V	D	P	A	P	S	G	D	R	A	R	P	G	D	A	I	L	I	S
Template Known Secondary structure									T	T																					T													B	T	.	T	B	S	S														S	S				T	T				T	T						S
Template Predicted Secondary structure																																														.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		G	S	S	G	P	H	S	N	G	Y	S	L	V	R	K	I	L	E	V	S	G	C	D	P	Q	T	T	E	L	D	G	K	P	L	A	D	H	L	L	A	P	T	R	I	Y	V	K	S	V	L	E	L	I	E	K	V	D	V	H	A	I	A	H	L	T	G	G	G	F	W	E	N	I	P	R	V	L	P	.	D
Query Conservation																																																																																.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	M	G	D	H	G	L	T	I	L	S	Q	R	Q	G	L	N	F	A	A	D	V	C	S	D	S	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	R	V	V	E	K	L	V	L	E	V	G	D	I	H	V	L	R	D	P	T	R	G	G	L	A	T	T	L	N	E	I	A	G	Q	S
Template Known Secondary structure		S		S	S										T	T	T					T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.												T											T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.															.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.																.	.	.
Query SS confidence																																																														.	.																.	.	.
Query Sequence		N	T	Q	A	V	I	D	E	S	S	W	Q	W	P	E	V	F	N	W	L	Q	T	A	G	N	V	E	H	H	E	M	Y	R	T	F	N	C	G	V	G	M	I	I	A	L	P	A	P	E	V	D	K	A	L	A	L	L	N	A	N	.	.	G	E	N	A	W	K	I	G	I	I	K	A	S	D	S	.	.	.
Query Conservation																																																														.	.																.	.	.
Alig confidence																														.	.	.								.																						.	.																.	.	.
Template Conservation																														.	.	.								.
Template Sequence		Q	A	V	C	H	V	L	E	T	A	V	P	V	R	E	S	V	R	N	G	C	S	F	L	G	L	D	P	.	.	.	L	Y	L	A	N	E	G	.	K	L	I	C	I	L	P	E	E	R	A	E	A	A	L	A	V	L	R	E	G	P	H	G	E	H	A	A	R	I	G	S	V	K	S	V	G	E	L	G	A
Template Known Secondary structure		T	S						G	G	G	S													T	T			T	.	.	.	T	T	S			S	S	.																				T	S	T	T	G	G	G										T	T	S	S	S	S
Template Predicted Secondary structure																														.	.	.								.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
				339	340	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	E	Q	R	V	V	I	E
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		A	R	A	G	Q	V	V	M	E
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions