Job Description P08178 Confidence 100.00% Date Thu Jan 5 11:00:42 GMT 2012 Rank 15 Aligned Residues 275 % Identity 22% Template c2z1eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hydrogenase expression/formation protein hype; PDBTitle: crystal structure of hype from thermococcus kodakaraensis (outward2 form) Resolution 1.55 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		G	G	L	G	G	F	G	A	L	C	A	L	P	Q	K	Y	R	E	P	V	L	V	S	G	T	D	G	V	G	T	K	L	R	L	A	M	D	L	K	R	H	D	T	I	G	I	D	L	V	A	M	C	V	N	D	L	V	V	Q	G	A	E	P	L	F	F	L	D	Y	Y	A	T	G	K	L	.	D	V	D	T
Query Conservation																																																																													.
Alig confidence																		.	.	.	.															.	.	.	.																																						.
Template Conservation																		.	.	.	.															.	.	.	.
Template Sequence		G	G	E	L	D	D	G	A	T	I	P	F	G	D	K	H	.	.	.	.	I	V	F	T	I	D	G	H	T	V	K	P	L	F	.	.	.	.	F	P	G	G	D	I	G	R	L	A	V	S	G	T	V	N	D	L	A	V	M	G	A	E	P	I	A	L	A	N	S	M	I	I	G	E	G	L	D	M	E	V
Template Known Secondary structure							S							T	T			.	.	.	.											S	S	S		.	.	.	.		T	T																	T	T	T														T	T
Template Predicted Secondary structure																		.	.	.	.															.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	A	V	I	S	G	I	A	E	G	C	L	Q	S	G	C	S	L	V	G	G	E	T	A	E	M	P	G	M	Y	H	G	E	D	Y	D	V	A	G	F	C	V	G	V	V	E	K	S	E	I	I	D	G	S	K	V	S	D	G	D	V	L	I	A	L	G	S	S	G	P	H	S	N	G	Y	S	L	V	R
Query Conservation
Alig confidence																																	.	.	.	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		L	K	R	V	L	K	S	M	D	E	T	A	R	E	V	P	V	P	I	V	T	G	D	T	K	V	V	E	D	K	I	.	.	.	.	.	E	M	F	V	I	T	A	G	I	G	I	A	E	H	P	V	S	D	A	G	A	K	V	G	D	A	V	L	V	S	G	T	I	G	D	H	G	I	A	L	M	S	H	R
Template Known Secondary structure																T	T												S	S	S		.	.	.	.	.													S	S				T	T				T	T						S	S		S	S
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		K	I	L	E	V	S	G	C	D	P	Q	T	T	E	L	D	G	K	P	L	A	D	H	L	L	A	P	T	R	I	Y	V	K	S	V	L	E	L	I	E	K	V	D	V	H	A	I	A	H	L	T	G	G	G	F	W	E	N	I	P	R	V	L	P	.	D	N	T	Q	A	V	I	D	E	S	S	W	Q	W	P
Query Conservation																																																																		.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	I	A	F	E	T	E	L	K	.	.	.	.	.	.	.	.	.	.	.	.	S	D	V	A	P	I	W	D	V	V	K	A	V	A	E	T	I	G	W	E	N	I	H	A	M	K	D	P	T	R	A	G	L	S	N	A	L	N	E	I	A	R	K	S	N	V	G	I	L	V	R	E	A	D	I	P	I	R
Template Known Secondary structure		T	T				S	S				.	.	.	.	.	.	.	.	.	.	.	.																			G	G	G									T	T														T							G	G	G	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.													.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		E	V	F	N	W	L	Q	T	A	G	N	V	E	H	H	E	M	Y	R	T	F	N	C	G	V	G	M	I	I	A	L	P	A	P	E	V	D	K	A	L	A	L	L	N	A	N	.	.	G	E	N	A	W	K	I	G	I	I	K	A	S	D	S	E	Q	R	V	V
Query Conservation																																																.	.
Alig confidence																.	.	.								.																						.	.
Template Conservation																.	.	.								.
Template Sequence		P	E	V	R	A	A	S	E	M	L	G	I	S	P	.	.	.	Y	D	V	A	N	E	G	.	K	V	V	M	V	V	A	R	E	Y	A	E	E	A	L	E	A	M	R	K	T	E	K	G	R	N	A	A	I	I	G	E	V	I	A	D	Y	R	G	K	V	L	L
Template Known Secondary structure												T			G	.	.	.	G	G	S			S	S	.								G	G	G										T	S	S	T	T	T	T									S	S	S	T	T
Template Predicted Secondary structure																.	.	.								.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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