Job Description P08178 Confidence 100.00% Date Thu Jan 5 11:00:42 GMT 2012 Rank 16 Aligned Residues 288 % Identity 17% Template c2yxzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thiamin-monophosphate kinase; PDBTitle: crystal structure of tt0281 from thermus thermophilus hb8 Resolution 1.90 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	I	K	G	V	V	K	K	T	R	R	P	E	V	M	G	G	L	G	G	F	G	A	L	C	A	L	P	Q	K	Y	R	E	P	V	L	V	S	G	T	D	G	V	G	T	K	L	R	L	A	M	D	L	K	R	H	D	T	I	G	I	D	L	V	A	M	C	V	N	D	L	V	V	Q	G	A	E	P	L
Query Conservation
Alig confidence																																		.	.	.	.															.
Template Conservation																																		.	.	.	.															.
Template Sequence		A	L	L	A	R	L	A	P	L	G	Y	P	P	E	A	P	L	P	P	G	D	D	A	G	G	V	W	A	E	G	R	A	.	.	.	.	W	L	L	K	T	D	G	F	L	Y	R	E	V	A	.	L	K	G	M	G	P	F	E	V	G	F	R	G	V	A	A	T	A	S	D	L	L	A	K	M	G	R	P	L
Template Known Secondary structure								T	T	T	T			T	T		S	S		T	T	S	S	S						T	T			.	.	.	.															.		T	T																					T	T
Template Predicted Secondary structure																																		.	.	.	.															.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		F	F	L	D	Y	Y	A	T	G	K	L	.	D	V	D	T	A	S	A	V	I	S	G	I	A	E	G	C	L	Q	S	G	C	S	L	V	G	G	E	T	A	E	M	P	G	M	Y	H	G	E	D	Y	D	V	A	G	F	C	V	G	V	V	E	K	S	E	I	I	D	G	S	K	V	S	D	G	D	V	L	I
Query Conservation													.
Alig confidence													.																																		.	.	.	.	.	.	.	.																		.
Template Conservation																																															.	.	.	.	.	.	.	.																		.
Template Sequence		G	F	T	L	G	L	F	L	P	E	D	L	E	E	G	F	V	L	E	L	V	R	G	A	A	E	A	A	K	R	L	G	A	F	L	L	G	G	D	T	N	R	G	V	E	.	.	.	.	.	.	.	.	V	A	L	T	V	S	G	Y	A	L	A	E	A	P	L	P	R	.	K	A	L	P	G	D	L	L	Y
Template Known Secondary structure											T	T																				T	T												S	S	.	.	.	.	.	.	.	.												S	S				S	.				T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.																		.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.
		183	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		A	L	G	S	.	S	G	P	H	S	N	G	Y	S	L	V	R	K	I	L	E	V	S	G	C	D	P	Q	T	T	E	L	D	G	K	P	L	A	D	H	L	L	A	P	T	R	I	Y	V	K	S	V	L	E	L	I	E	K	V	D	V	H	A	I	A	H	L	T	G	G	G	F	W	E	N	I	P	R	V	L
Query Conservation						.
Alig confidence						.																							.	.	.	.	.	.	.	.	.															.	.	.	.															.											.
Template Conservation																													.	.	.	.	.	.	.	.	.															.	.	.	.															.											.
Template Sequence		L	A	G	D	R	W	G	R	T	G	A	A	I	R	A	H	Y	E	G	R	S	L	E	G	F	P	K	.	.	.	.	.	.	.	.	.	I	R	E	A	A	F	Y	P	L	P	R	L	E	L	.	.	.	.	L	A	L	S	G	L	L	R	G	S	L	D	S	S	.	D	G	L	A	E	T	L	W	Q	L	.
Template Known Secondary structure				S	S		T	T												T				T	T				.	.	.	.	.	.	.	.	.												G	G	G	.	.	.	.	G	G	G	T	T	T		S						S	.	S										.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.															.	.	.	.															.											.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.										.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	N	T	Q	A	V	I	D	E	S	S	W	Q	W	P	E	V	F	N	W	L	Q	T	A	G	N	V	E	H	H	E	M	Y	R	T	F	N	C	G	V	G	M	I	I	A	L	P	A	P	E	V	D	K	A	L	A	L	L	N	A	N	G	E	N	A	W	K	I	G	I	I	K	A	S	D	S	E	Q	R
Query Conservation
Alig confidence		.																											.																																																		.	.	.
Template Conservation		.																											.																																																		.	.	.
Template Sequence		.	A	D	L	G	V	G	V	E	V	E	A	L	P	L	Y	P	D	V	L	A	F	A	G	S	E	E	.	A	A	L	E	L	V	L	Y	G	G	E	E	F	E	A	V	L	V	V	P	Q	E	G	A	A	A	V	E	A	R	A	K	A	K	G	L	P	L	F	R	A	G	R	V	V	A	G	E	G	.	.	.
Template Known Secondary structure		.		T	T	T																			S	S			.								S													S	T	T											T	T											S	S	S		.	.	.
Template Predicted Secondary structure		.																											.																																																		.	.	.
Template SS confidence
			221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		342	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	L	R
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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