Job Description P08178 Confidence 100.00% Date Thu Jan 5 11:00:42 GMT 2012 Rank 12 Aligned Residues 297 % Identity 18% Template c2rb9D_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hype protein; PDBTitle: crystal structure of e.coli hype Resolution 2.00 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		A	L	V	G	R	I	K	G	V	V	K	K	T	R	R	P	E	V	M	G	G	L	G	G	F	G	A	L	C	A	L	P	.	Q	K	Y	R	E	P	V	L	V	S	G	T	D	G	V	G	T	K	L	R	L	A	M	D	L	K	R	H	D	T	I	G	I	D	L	V	A	M	C	V	N	D	L	V	V	Q	G
Query Conservation																																		.
Alig confidence																.																		.																						.	.	.	.
Template Conservation																.																																								.	.	.	.
Template Sequence		S	M	Q	Q	L	I	N	S	L	F	M	E	A	F	.	A	N	P	W	L	A	E	Q	E	D	Q	A	R	L	D	L	A	Q	L	V	A	E	G	D	R	L	A	F	S	T	D	S	Y	V	I	D	P	L	F	.	.	.	.	F	P	G	G	N	I	G	K	L	A	I	C	G	T	A	N	D	V	A	V	S	G
Template Known Secondary structure																.							T			S	S													S												S	S	S		.	.	.	.		T	T																	T	T	T
Template Predicted Secondary structure																.																																								.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		A	E	P	L	F	F	L	D	Y	Y	A	T	G	K	L	.	D	V	D	T	A	S	A	V	I	S	G	I	A	E	G	C	L	Q	S	G	C	S	L	V	G	G	E	T	A	E	M	P	G	M	Y	H	G	E	D	Y	D	V	A	G	F	C	V	G	V	V	E	K	S	E	I	I	D	G	S	K	V	S	D	G
Query Conservation																	.
Alig confidence																	.																																		.
Template Conservation																																																			.
Template Sequence		A	I	P	R	Y	L	S	C	G	F	I	L	E	E	G	L	P	M	E	T	L	K	A	V	V	T	S	M	A	E	T	A	R	T	A	G	I	A	I	V	T	G	D	T	K	V	V	Q	R	.	G	A	A	D	K	L	F	I	N	T	A	G	M	G	A	I	P	T	N	I	H	W	G	A	Q	T	L	T	A	G
Template Known Secondary structure															T	T																					T													T	.	T	S	S	S	S													T	T					G	G	G			T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L	I	A	L	G	S	S	G	P	H	S	N	G	Y	S	L	V	R	K	I	L	E	V	S	G	C	D	P	Q	T	T	E	L	D	G	K	P	L	A	D	H	L	L	A	P	T	R	I	Y	V	K	S	V	L	E	L	I	E	K	V	D	V	H	A	I	A	H	L	T	G	G	G	F	W	E	N	I	P
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	L	L	V	S	G	T	L	G	D	H	G	A	T	I	L	N	L	R	E	Q	L	G	L	D	G	E	L	V	S	D	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	L	T	P	L	I	Q	T	L	R	D	I	P	G	V	K	A	L	R	D	A	T	R	G	G	V	N	A	V	V	H
Template Known Secondary structure							S	S		S	S											T	T		S		T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S	S										T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		259	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure						.																																																														.	.
Query SS confidence						.																																																														.	.
Query Sequence		R	V	L	P	.	D	N	T	Q	A	V	I	D	E	S	S	W	Q	W	P	E	V	F	N	W	L	Q	T	A	G	N	V	E	H	H	E	M	Y	R	T	F	N	C	G	V	G	M	I	I	A	L	P	A	P	E	V	D	K	A	L	A	L	L	N	A	N	.	.	G	E	N	A	W	K	I	G	I	I	K	A
Query Conservation						.																																																														.	.
Alig confidence						.																														.	.	.								.																						.	.
Template Conservation																																				.	.	.								.
Template Sequence		E	F	A	A	A	C	G	C	G	I	E	I	S	E	S	A	L	P	V	K	P	A	V	R	G	V	C	E	L	L	G	L	D	A	.	.	.	L	N	F	A	N	E	G	.	K	L	V	I	A	V	E	R	N	A	A	E	Q	V	L	A	A	L	H	S	H	P	L	G	K	D	A	A	L	I	G	E	V	V	E
Template Known Secondary structure								T							T	T	T															T			G	.	.	.	G	G	S			S	S	.								G	G	G										T	S	G	G	G	T	T									S
Template Predicted Secondary structure																																				.	.	.								.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	S	E	Q	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	G	V	R	L	A
Template Known Secondary structure		S		S
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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