Job Description P08178 Confidence 100.00% Date Thu Jan 5 11:00:42 GMT 2012 Rank 19 Aligned Residues 257 % Identity 20% Template c2hs0A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine synthase ii; PDBTitle: t. maritima purl complexed with atp Resolution 2.52 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	L	G	G	F	G	A	L	C	A	L	P	Q	K	Y	R	E	P	V	L	V	S	G	T	D	G	V	G	T	K	L	R	L	A	M	D	L	K	R	H	D	T	I	G	I	D	L	V	A	M	C	V	N	D	L	V	V	Q	G	A	E	P	L	F	F	L	D	Y	Y	A	T	G	K	L	D	V	D	T	A
Query Conservation
Alig confidence																			.	.	.																				.	.	.	.	.																																.	.	.	.
Template Conservation																			.	.	.																				.	.	.	.	.																																.	.	.	.
Template Sequence		T	G	F	E	G	N	A	G	V	V	N	L	D	D	Y	Y	S	.	.	.	V	A	F	K	I	E	S	H	N	H	P	S	A	I	E	P	Y	N	G	.	.	.	.	.	A	A	T	G	V	G	G	I	I	R	D	V	L	A	M	G	A	R	P	T	A	I	F	D	S	L	H	M	S	R	I	.	.	.	.	I
Template Known Secondary structure					T	T			T				S	S	S	S			.	.	.																				.	.	.	.	.														T	T	T													S	S		.	.	.	.
Template Predicted Secondary structure																			.	.	.																				.	.	.	.	.																																.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		S	A	V	I	S	G	I	A	E	G	C	L	Q	S	G	C	S	L	V	G	G	E	T	A	E	M	P	G	M	Y	H	G	E	D	Y	D	V	A	G	F	C	V	G	V	V	E	K	S	E	I	I	D	G	S	K	V	S	D	G	D	V	L	I	A	L	G	.	S	S	G	P	H	S	N	G	Y	S	L	V	R
Query Conservation																																																																				.
Alig confidence																															.	.																																				.								.	.	.	.	.	.
Template Conservation																															.	.																																												.	.	.	.	.	.
Template Sequence		D	G	I	I	E	G	I	A	D	Y	G	N	S	I	G	V	P	T	V	G	G	E	L	R	I	S	S	L	Y	.	.	A	H	N	P	L	V	N	V	L	A	A	G	V	V	R	N	D	M	L	V	D	S	K	A	S	R	P	G	Q	V	I	V	I	F	G	G	A	T	G	R	D	G	I	.	.	.	.	.	.
Template Known Secondary structure																T												G	G	G	.	.	T	T														T	T	S				S	S			S	T	T								S		B		S	T	T		.	.	.	.	.	.
Template Predicted Secondary structure																															.	.																																												.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		K	I	L	E	V	S	G	C	D	P	Q	T	T	E	L	D	G	K	P	L	A	D	H	L	L	A	P	T	R	I	Y	V	K	S	V	L	E	L	I	E	K	V	D	V	H	A	I	A	H	L	T	G	G	G	F	W	E	N	I	P	R	V	L	P	.	D	N	T	Q	A	V	I	D	E	S	S	W	Q	W	P
Query Conservation																																																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.																																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	V	G	D	P	F	A	E	K	M	L	.	.	.	.	.	.	I	E	A	F	L	E	M	V	E	E	G	L	V	E	G	A	Q	D	L	G	A	G	G	V	L	S	A	T	S	E	L	V	A	K	G	N	L	G	A	I	V	H	L	D	R	V	P	L	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.										T	T			S							T	T													T	T							G	G	G	S		B	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
															207	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	F	N	W	L	Q	T	A	G	N	V	E	H	H	E	M	Y	R	T	F	N	C	G	V	G	M	I	I	A	L	P	A	P	E	V	D	K	A	L	A	L	L	N	A	N	G	E	N	A	W	K	I	G	I	I	K	A	S	D	S	E	Q	R	V	V	I	E
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.															.																																		.
Template Conservation				.	.	.	.	.	.	.	.															.																																		.
Template Sequence		E	P	.	.	.	.	.	.	.	.	D	M	E	P	W	E	I	L	I	S	E	S	Q	E	.	R	M	A	V	V	T	S	P	Q	K	A	S	R	I	L	E	I	A	R	K	H	L	L	F	G	D	V	V	A	E	V	I	E	.	E	P	V	Y	R	V	M	Y	R
Template Known Secondary structure		S	T	.	.	.	.	.	.	.	.	T												S	S	.								T	T	T											T	T											S	.	S	S							T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.															.																																		.
Template SS confidence
		268	.									270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions