Return to main results Retrieve Phyre Job Id

Job DescriptionP08178
Confidence21.27%DateThu Jan 5 11:00:42 GMT 2012
Rank100Aligned Residues30
% Identity10%Templatec2fn9A_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:ribose abc transporter, periplasmic ribose-binding protein; PDBTitle: thermotoga maritima ribose binding protein unliganded form
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130........
Predicted Secondary structure 







Query SS confidence 





























Query Sequence  YATGKLDVDTASAVISGIAEGCLQSGCSLV
Query Conservation 
            
  

  
    
  

Alig confidence 





























Template Conservation 

              

       
    
Template Sequence  IVISTLNNPWFVVLAETAKQRAEQLGYEAT
Template Known Secondary structure  S
SSSTT
Template Predicted Secondary structure 







Template SS confidence 





























   6...10.........20.........30.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions