Job Description P64631 Confidence 30.09% Date Thu Jan 5 12:10:02 GMT 2012 Rank 28 Aligned Residues 117 % Identity 20% Template c2dx7B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:aspartate racemase; PDBTitle: crystal structure of pyrococcus horikoshii ot3 aspartate racemase2 complex with citric acid Resolution 2.00 Å

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		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20									.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure										.													.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.													.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	K	I	G	V	A	G	.	L	Q	R	E	Q	I	K	K	T	I	E	A	.	.	.	.	.	.	.	.	T	A	P	G	C	F	E	V	F	I	H	N	D	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	M	K	V	K	S	G	Q	L	D	Y	Y	I	G
Query Conservation										.													.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.													.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	T	I	G	I	L	G	G	M	G	P	L	A	T	A	E	L	F	R	R	I	V	I	K	T	P	A	K	R	D	Q	E	H	P	K	V	I	I	F	N	N	P	Q	I	P	D	R	T	A	Y	I	L	G	K	G	E	D	P	R	P	Q	L	I	W	T	A	K	R	L	E	E	C	G	A	D	F	I	I	M
Template Known Secondary structure											S	S														T	S			S	S	G	G	G	S									T	T	S									S	S																			T		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		51	.	.	.	.	.	.	.																		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	C	N	T	G	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	S	I	A	I	A	V	I	G	Y	N	K	S	C	T	I	A	K	P	G	I	K	A	K	D	E	H	I	A	K	M	I	A	E	G	K	V	A	F	G	L	S	V	E	H	V	E	H	A	I	P	M	L	I
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	N	T	A	H	A	F	V	E	D	I	R	K	A	I	K	I	P	I	I	S	M	I	E	E	T	A	K	K	V	K	E	L	G	F	K	K	A	G	L	L	A	T	T	G	T	I	V	S	G	V	Y	E	K	E	F	S	K	Y	G	V	E	I	M	T	P	T	E	D	E	Q	K	D	V	M	R	G	I	Y
Template Known Secondary structure				S	G	G	G	G	G									S	S		B														T	T		S														T									T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		114	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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