Return to main results Retrieve Phyre Job Id

Job DescriptionP64631
Confidence15.97%DateThu Jan 5 12:10:02 GMT 2012
Rank45Aligned Residues40
% Identity13%Templatec2dakA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 5; PDBTitle: solution structure of the second uba domain in the human2 ubiquitin specific protease 5 (isopeptidase 5)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90..... ....100.........110.....
Predicted Secondary structure 









......
Query SS confidence 



















. . . . . .



















Query Sequence  AKPGIKAKDEHIAKMIAEGK. . . . . . VAFGLSVEHVEHAIPMLINH
Query Conservation     
  
  
 
   
  

...... 




 
  
  

 

  
Alig confidence 



















......



















Template Conservation 
      
   
  
  


    
  

     


 
  


  
Template Sequence  SSGSSGPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH
Template Known Secondary structure 


S



T

TTS
S
Template Predicted Secondary structure 















Template SS confidence 













































   2.......10.........20.........30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions