|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
|
|
. | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
. | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Query Sequence |   |
M | K | K | I | G | V | A | G | L | Q | R | E | Q | I | K | K | T | I | E | A | T | . |
. |
. |
A | P | G | C | F | E | V | F | I | H | N | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | E | A | A | M | K | V | K | S | G | Q | L | D | Y | Y | I | G | . |
A | C | N | T |
Query Conservation |   |
|   |
|
|   |
|
|
|
|   |
|   |
|
|   |
|   |
|   |   |   | . | . | . |   |   |   |   |
|
|
|   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|
|
| . |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
|   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|
|   |   |
|   |
|   |   |   |
|
Template Sequence |   |
M | I | T | V | S | I | A | G | G | S | Q | P | E | I | L | Q | L | V | K | K | A | L | K | E | A | E | Q | P | L | Q | F | I | V | F | D | T | N | E | N | L | D | T | E | N | L | W | K | Y | V | H | C | S | D | E | A | A | V | A | Q | E | A | V | S | L | V | A | T | G | Q | A | Q | I | L | L | K | G | I | I | Q | T |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  | S | S |
|
|
|
| S | S |
|
| S |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
| S |  |  |  |  |
| S | S |
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
55 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
G | A |
Query Conservation |   |
|   |
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
H | T |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
81 | . |
  |