Job Description P39099 Confidence 97.07% Date Thu Jan 5 11:58:15 GMT 2012 Rank 292 Aligned Residues 177 % Identity 20% Template d2h6ma1 SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Resolution 1.40

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		S	L	A	P	M	L	E	K	V	L	P	A	V	V	S	V	R	V	E	G	T	A	S	Q	G	Q	K	I	P	E	E	F	K	K	F	F	G	D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	.	.	.	Q	A	Q	K	I
Query Conservation																																																																										.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.											.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		S	T	L	E	I	A	G	L	V	R	K	N	L	V	Q	F	G	V	G	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	S	V	R	W	V	M	N	A	L	G	V	K	D	D	.	.	W	L	L	V	P	S	H	A	Y	K	F	E	K	D	Y	E	M	M
Template Known Secondary structure																						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S													B	T	.	.						G	G	G	T	T	T	S	T	T	G	G	G	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.																								.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.											.
Predicted Secondary structure														.	.	.	.	.	.							.																					.	.	.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.							.																					.	.	.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		S	I	Q	L	N	D	G	R	E	F	D	A	.	.	.	.	.	.	K	L	I	G	S	D	.	D	Q	S	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	Q	I	A	.	.	.	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	.	.	.	.	.	.	.	.	.	.	L
Query Conservation														.	.	.	.	.	.							.																					.	.	.																						.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.							.																					.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	Y	F	N	R	G	G	T	Y	Y	S	I	S	A	G	N	V	V	I	Q	S	L	D	V	G	F	Q	D	V	V	L	M	K	V	P	T	I	P	K	F	R	D	I	T	Q	H	F	I	K	K	G	D	V	P	R	A	L	N	R	L	A	T	L	V	T	T	V	N	G	T	P	M	L	I	S	E	G	P	L
Template Known Secondary structure								T	T							G	G	G	S					S	S	S	S			S							T	T	S			B				G	G	G	B			G	G	G	G	G	G	G	T	T	S									T	T									S
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	.	.	.	.	N	G	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S
Query Conservation																																														.	.	.	.
Alig confidence																																														.	.	.	.											.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		K	M	E	E	K	A	T	Y	V	H	K	K	N	D	G	T	T	V	D	L	T	V	D	Q	A	W	R	G	K	G	E	G	L	P	G	M	C	G	G	A	L	V	S	S	N	Q	S	I	Q	N	A	I	L	G	I	H	V	A	.	.	.	.	.	.	G	G	N	S	I	L	V	A	K	L	V
Template Known Secondary structure														T	T	S																			T	T		T	T						S		G	G	G	T	T									.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions