Return to main results Retrieve Phyre Job Id

Job DescriptionP39099
Confidence91.91%DateThu Jan 5 11:58:15 GMT 2012
Rank348Aligned Residues174
% Identity18%Templated2bz6h1
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.6

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120. ........130...... ...140.........150
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Query Sequence  LGSGVIINASKGYVLTNNHVINQAQKISIQL. . . . . . . . . . . . NDGREFDAKLIGSDD. . . . . . . QSDIALLQIQNPSK.
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Template Sequence  LCGGTLINTI. . WVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVL
Template Known Secondary structure 
SSS..
GGGGTT
S
GGGS

BTT


S

TT

TTS
SS

SS



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   41........50 .........60.........70.........80.........90.........100.........110........
 
   151........160.........170.........180......... 190.........200.....
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Query Sequence  . . . . . . . . LTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSAL. . . . . . . . . . . . . GRSGLNLEGLENFIQT. . . .
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Template Sequence  TDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSD
Template Known Secondary structure  BTTB


B


TGGG

S
BSSTTS
B
SB

S


TT




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SS
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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   206...210.........220.... .....230.........240.........250.........260......
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Query Sequence  . DASINRGNSGGALLNLNGE. . . LIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKR
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Template Sequence  GSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSEPRPGV
Template Known Secondary structure  SS
B

GGGTT
TT
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TT

GGGGTS


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   187..190.........200.........210.........220.........230.........240.........250.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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