Job Description P39099 Confidence 98.40% Date Thu Jan 5 11:58:15 GMT 2012 Rank 249 Aligned Residues 164 % Identity 20% Template d2bhga1 SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Resolution 1.9

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																.						.	.																				.	.	.	.	.																		.
Query SS confidence																																.						.	.																				.	.	.	.	.																		.
Query Sequence		A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	.	Q	K	I	S	I	.	.	Q	L	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.	.	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	Q	I	A	.
Query Conservation																																.						.	.																				.	.	.	.	.																		.
Alig confidence																		.	.													.						.	.																				.	.	.	.	.																		.
Template Conservation																		.	.
Template Sequence		D	G	K	T	V	A	I	C	C	A	T	G	V	F	G	T	.	.	A	Y	L	V	P	R	H	L	F	A	E	K	Y	D	K	I	X	L	D	G	R	A	X	T	D	S	D	Y	R	V	F	E	F	E	I	K	V	K	G	Q	D	X	L	S	D	A	A	L	X	V	L	H	R	G	N	K	V	R	D	I	T	K
Template Known Secondary structure		T	T													B	T	.	.										T	S			S					T	T					G	G	G											S	S	S					S							S	S	S			B				G	G
Template Predicted Secondary structure																		.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
			156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure		.																																																																	.	.	.
Query SS confidence		.																																																																	.	.	.
Query Sequence		.	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	.	.	.	N	L	N	G	E	L	I	G	I	N	T	A
Query Conservation		.																																																																	.	.	.
Alig confidence		.																														.	.	.																																	.	.	.
Template Conservation																																.	.	.
Template Sequence		H	F	R	D	T	A	R	X	K	K	G	T	P	V	V	G	V	V	N	N	A	D	V	G	R	L	I	F	S	G	.	.	.	E	A	L	T	Y	K	D	I	V	V	T	X	P	G	L	F	A	Y	K	A	A	T	R	A	G	Y	A	G	G	A	V	L	A	K	D	G	A	D	T	F	I	V	G	T	H	S	A
Template Known Secondary structure		G	B		S	S					T	T										T	T	T								.	.	.			S	S									T	T										T	T		T	T								T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D	F
Query Conservation
Alig confidence		.	.	.	.	.	.														.	.
Template Conservation		.	.	.	.	.	.														.	.
Template Sequence		.	.	.	.	.	.	G	G	N	G	V	G	Y	C	S	C	V	S	R	.	.	S	X	L	Q	K	X	K	A	H
Template Known Secondary structure		.	.	.	.	.	.			T	T										.	.
Template Predicted Secondary structure		.	.	.	.	.	.														.	.
Template SS confidence
								184	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions