Return to main results Retrieve Phyre Job Id

Job DescriptionP39099
Confidence97.15%DateThu Jan 5 11:58:15 GMT 2012
Rank290Aligned Residues170
% Identity18%Templated1z8ga1
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110..... ....120.........130.........140.......
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Query Sequence  GSGVIINASKGYVLTNNHVINQAQ. . . . . . . . . . . . . . . . . . . . . . . . KISIQLNDGREFDAKLIGSDDQSDIALLQIQN
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Template Sequence  CGGSLLSGD. . WVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSS
Template Known Secondary structure  SSSS..
GGG

GGG

GGGS
SBTT
TTS
TT
GGGT
TT



TT

SS
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   188.190...... ...200.........210.........220.........230.........240.........250.........260.....
 
   148.150. ..... ...160.........170.........180.........190 .........200......
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Query Sequence  PSKL. . . . TQIAI. ADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALG. . . . . . . . . . . RSGLNLEGLENFIQTD. . . . .
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Template Sequence  PLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGG
Template Known Secondary structure 




SS



B


TT



TT
SSBSSTTS
B
SB

TSTTTTTT


TTS
TT
S
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   266...270.........280.........290.........300.........310.........320.........330.........340.....
 
   207..210.........220... ......230.........240.........250.........260...
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Query Sequence  ASINRGNSGGALLNLNG. . . . . . . ELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGE
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Template Sequence  IDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSE
Template Known Secondary structure 
B

TT
TT

TTSS

SSSS
TT

GGGGTTT
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   346...350.........360.........370.........380.........390.........400.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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