Return to main results Retrieve Phyre Job Id

Job DescriptionP39099
Confidence99.17%DateThu Jan 5 11:58:15 GMT 2012
Rank110Aligned Residues89
% Identity25%Templated1um1a_
SCOP infoPDZ domain-like PDZ domain-like PDZ domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   336...340.........350.........360.........370.........380.........390.........400....... ..410....
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Query Sequence  EPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAG. LQKDDVI
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Template Sequence  SSGYVFTVELERGPSGLGMGLIDGMHTHL. . . . . . . . . . . . . . . . . . . . . . . GAPGLYIQTLLPGSPAAADGRLSLGDRI
Template Known Secondary structure  S




TT


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SS
TTSS


TT
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   5....10.........20.........30... ......40.........50.........60.
 
   415....420... ......430.........440.......
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Query Sequence  IGVNRDRVN. . SIAEMRKVLAAKPAIIALQIVRGN
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Template Sequence  LEVNGSSLLGLGYLRAVDLIRHGGKKMRFLVAKSD
Template Known Secondary structure  SS
B
SS

T

S


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   62.......70.........80.........90......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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