Return to main results Retrieve Phyre Job Id

Job DescriptionP39099
Confidence95.32%DateThu Jan 5 11:58:15 GMT 2012
Rank322Aligned Residues179
% Identity19%Templated1tona_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.........120.... .....130........ .140.
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Query Sequence  DLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDG. . . . . . . REFDAKLIGSDDQS. . . . . . . . . . DIA
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Template Sequence  SQPWQVAVINEYLCGGVLIDPS. . WVITAAHCYSNNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLPVHDHSNDLM
Template Known Secondary structure  S
TTSSSTT..
GGG

S

S
SBTTS

TT


TT







STT

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   26...30.........40....... ..50.........60.........70.........80.........90.........100...
 
   142.......150. ........160.........170..... ....180.........190.........200.........
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Query Sequence  LLQIQNPSKL. . . TQIAIADSDKLRVGDFAVAVGNPF. . . . . . . . . GLGQTATSGIVSALGRSGLNLEGLENFIQTDASI
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Template Conservation 
                                                                               
Template Sequence  LLHLSEPADITGGVKVIDLPTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEM
Template Known Secondary structure  SS




SS







S


TT
SS
SSSSS



SB

GGG
GGGGSTTGGGG
T
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   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   210.........220.........230.........240.........250.........260
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Query Sequence  . . . . . . NRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLID
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Template Sequence  EGGKDTCAGDSGGPLIC. DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMK
Template Known Secondary structure  T
S
B

TT
TT
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SS
S
TT

GGGG
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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