Return to main results Retrieve Phyre Job Id

Job DescriptionP39099
Confidence99.28%DateThu Jan 5 11:58:15 GMT 2012
Rank72Aligned Residues77
% Identity35%Templated1sota1
SCOP infoPDZ domain-like PDZ domain-like HtrA-like serine proteases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   266...270.........280.........290.........300.........310.........320.........330.........340.....
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  RGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGL
Query Conservation     


             

    

 
  
   
 
  


  

 

 


  
         
     
  
 
 
Alig confidence 





................

























































Template Conservation 

 

 ................   

 
  
   


  


  

 
  


  
         
     
  
 
 
Template Sequence  RGYIGI. . . . . . . . . . . . . . . . GGRGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETXDQVAEIRPGSVIPVVV
Template Known Secondary structure 



................








SSSTTTSSS

TT

BSSSSB


SS
TT


Template Predicted Secondary structure 
................























Template SS confidence 















































































   256...260. ........270.........280.........290.........300.........310.........
 
   346...350.........360...
Predicted Secondary structure 







Query SS confidence 

















Query Sequence  LRNGKPLEVEVTLDTSTS
Query Conservation   
        
 
     
Alig confidence 

.....










Template Conservation   
.....   
 
 
 
 
Template Sequence  QL. . . . . TLQVTIQEYPA
Template Known Secondary structure 

.....




Template Predicted Secondary structure  .....


Template SS confidence 

















   341. .......350...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions