Job Description P39099 Confidence 99.93% Date Thu Jan 5 11:58:15 GMT 2012 Rank 23 Aligned Residues 195 % Identity 16% Template d1q31a_ SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Viral proteases Resolution 2.70

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		L	E	K	V	L	P	A	V	V	S	V	R	V	E	G	T	A	S	Q	G	Q	K	I	P	E	E	F	K	K	F	F	G	D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	.	N	Q	A	Q	K	I	S	I	Q	L	N	D	G
Query Conservation																																																																				.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.												.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		Y	N	P	I	S	S	T	I	C	H	L	T	N	E	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	T	T	S	L	Y	G	I	G	F	.	G	P	F	I	I	T	N	K	H	L	F	R	R	N	N	G	T	L	L	V	Q	S	L	H	G
Template Known Secondary structure								T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											.	T	T						G	G	G	G	S	S		S								T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.																												.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		125	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																																																														.
Query SS confidence									.	.	.	.																																																														.
Query Sequence		R	E	F	D	A	K	L	.	.	.	.	I	G	S	D	D	Q	S	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	.	G	L	N	L	E	G	L
Query Conservation									.	.	.	.																																																														.
Alig confidence									.	.	.	.															.																														.	.	.	.	.													.
Template Conservation																											.																														.	.	.	.	.
Template Sequence		V	F	K	V	K	N	T	T	T	L	Q	Q	H	L	I	D	G	R	D	M	I	I	I	R	M	.	P	K	D	F	P	P	F	P	Q	K	L	K	F	R	E	P	Q	R	E	E	R	I	C	L	V	T	T	N	F	.	.	.	.	.	Q	T	K	S	M	S	S	M	V	S	D	T	S	C	T	F	P	S	S	D
Template Known Secondary structure						S		G	G	G							T	T	S	S							.		T	T	S					S				B					T	T											.	.	.	.	.	S	S	S	S												B			T	T
Template Predicted Secondary structure																											.																														.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.									.	.	.
Predicted Secondary structure																									.																											.																			.	.	.	.	.	.	.	.
Query SS confidence																									.																											.																			.	.	.	.	.	.	.	.
Query Sequence		E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	.	G	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	.	N	M	A	R	T	L	A	Q	Q	L	I	D	F	G	E	I	K	R	.	.	.	.	.	.	.	.	G	L	L
Query Conservation																									.																											.																			.	.	.	.	.	.	.	.
Alig confidence																									.																.	.	.	.								.																			.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		G	I	F	W	K	H	W	I	Q	T	K	D	G	Q	A	G	S	P	L	V	S	T	R	D	G	F	I	V	G	I	H	S	A	S	N	F	T	N	T	.	.	.	.	N	N	Y	F	T	S	V	P	K	N	F	M	E	L	L	T	N	Q	E	A	Q	Q	W	V	S	G	W	R	L	N	A	D	S	V	L	W	G
Template Known Secondary structure		T	T						S				T	T		T	T						T	T	T												S	S	S		.	.	.	.									T	T								T	T	S						S					S	S					T
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	K	G	T	E	M	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	H	K	V	F	M	S	K	P
Template Known Secondary structure		T					S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions