Job Description P39099 Confidence 98.36% Date Thu Jan 5 11:58:15 GMT 2012 Rank 252 Aligned Residues 166 % Identity 20% Template d1npma_ SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases Resolution 2.10

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.													.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.
Predicted Secondary structure																																	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query SS confidence																																	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query Sequence		G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	.	.	.	D	G	R	E	F	D	A	K	L	I	G	S	D	D	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	D	I	A	L	L	Q	I	Q	N	P	S	K	.	.	.	.	L	T
Query Conservation																																	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Alig confidence											.	.																					.	.	.															.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation											.	.
Template Sequence		C	G	G	V	L	V	G	D	R	.	.	W	V	L	T	A	A	H	C	K	K	Q	K	Y	S	V	R	L	G	D	H	S	L	Q	S	Q	P	E	Q	E	I	Q	V	A	Q	S	I	Q	H	P	C	Y	N	N	S	N	P	E	D	H	S	H	D	I	M	L	I	R	L	Q	N	S	A	N	L	G	D	K	V	K
Template Known Secondary structure									T	T	.	.						G	G	G			S	S						S		S	B	T	T																T	T			S	S		T	T			T	T								S	S					S	S	S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190														.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	Q	L	A	N	L	C	P	K	V	G	Q	K	C	I	I	S	G	W	G	T	V	T	S	P	Q	E	N	F	P	N	T	L	N	C	A	E	V	K	I	Y	S	Q	N	K	C	E	R	A	Y	P	G	K	I	T	E	G	M	V	C	A	G	S	S	N	G	A	D	T	C	Q	G	D	S	G	G	P	L	V
Template Known Secondary structure							S	S				T	T								S	S		S	S	S	S	S					S	B																		S	T	T	T			T	T							T	T			B			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		C	.	D	G	M	L	Q	G	I	T	S	W	G	S	D	P	C	G	K	P	E	K	P	G	V	Y	T	K	I	C	R	Y	T	T	W	I	K	K	T	M	D
Template Known Secondary structure			.	T	T											S	S	S		B	T	T	B
Template Predicted Secondary structure			.
Template SS confidence
		201		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions