Job Description P39099 Confidence 96.19% Date Thu Jan 5 11:58:15 GMT 2012 Rank 313 Aligned Residues 180 % Identity 16% Template d1m9ua_ SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases Resolution 2.30

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		P	A	V	V	S	V	R	V	E	G	T	A	S	Q	G	Q	K	I	P	E	E	F	K	K	F	F	G	D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		P	W	Q	L	S	Q	Q	R	Q	S	G	S	W	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	C	G	A	S	L	L	S	S	T	.	.	S	A	L	S	A	S	H	C	V	D	G	V	L	P	N	N	I	R	V	I	A	G	L	W	Q	Q	S	D
Template Known Secondary structure		T	T								S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S	S	.	.										T	T			G	G	G						S		S	B	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.																										.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
			122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.																		.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query SS confidence		.																		.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query Sequence		.	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.	.	.	.	.	.	D	I	A	L	L	Q	I	Q	N	P	S	K	.	.	.	.	.	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V
Query Conservation		.																		.	.	.	.	.	.	.	.	.													.	.	.	.	.
Alig confidence		.																		.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		T	S	G	T	Q	T	A	N	V	D	S	Y	T	M	H	E	N	Y	G	A	G	T	A	S	Y	S	N	D	I	A	I	L	H	L	A	T	S	I	S	L	G	G	N	I	Q	A	A	V	L	P	A	N	N	N	N	D	Y	A	G	T	T	C	V	I	S	G	W	G	R	T	D	G	T	N	N	L	P	D	I	L
Template Known Secondary structure			T	T													T	T	T	T		S	S	S	T	T	T	T								S	S						S	S								S		S	S				T	T								S	S		S	S	S	S	S				S	B
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.																			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																						.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																						.	.
Query Sequence		S	A	L	G	R	S	G	L	N	L	E	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	.	.	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																						.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																						.	.
Template Conservation
Template Sequence		Q	K	S	S	I	P	V	I	T	T	A	Q	C	T	A	A	M	V	G	V	G	G	A	N	I	W	D	N	H	I	C	V	Q	D	P	A	G	N	T	G	A	C	N	G	D	S	G	G	P	L	N	C	P	D	G	G	T	R	V	V	G	V	T	S	W	V	V	S	S	G	L	G	A	C	L	P	D	Y	P	S
Template Known Secondary structure								B											T	T	S	T	T					T	T							T	T	S			B			T	T		T	T							S	S	S												B		T	T	S		B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
			245	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	I	P	S	N	M	A	R	T	L	A	Q	Q
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		V	Y	T	R	V	S	A	Y	L	G	W	I	G	D
Template Known Secondary structure						G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions