Return to main results Retrieve Phyre Job Id

Job DescriptionP39099
Confidence99.36%DateThu Jan 5 11:58:15 GMT 2012
Rank64Aligned Residues73
% Identity48%Templated1ky9b2
SCOP infoPDZ domain-like PDZ domain-like HtrA-like serine proteases
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   380.........390.........400.........410.........420.........430.........440.........450..
Predicted Secondary structure 





























Query SS confidence 








































































Query Sequence  LSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKPAIIALQIVRGNESIYL
Query Conservation             

 
  
  

 
  


  

 

 


  
 
      

      
 
 
 
 
    
Alig confidence 








































































Template Conservation    
    
   

 
  
   


  


  



  


  
                
 
 
 
 
    
Template Sequence  FNEXSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYL
Template Known Secondary structure 


B


TTTS


B



SS
TTGGGT

SS
TT
SSTTT

S


SSS
Template Predicted Secondary structure 



























Template SS confidence 








































































   368.370.........380.........390.........400.........410.........420.........430.........440
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions