 |
Job Description | P39099 | Confidence | 99.65% | Date | Thu Jan 5 11:58:15 GMT 2012 |
Rank | 45 | Aligned Residues | 94 |
% Identity | 60% | Template | d1ky9a1 |
SCOP info | PDZ domain-like
| PDZ domain-like
| HtrA-like serine proteases
|
Resolution | 2.80 |
|
 |
  |   |
264 | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | R | G | L | L | G | I | K | G | T | E | M | S | A | D | I | A | K | A | F | N | L | D | V | Q | R | G | A | F | V | S | E | V | L | P | G | S | G | S | A | K | A | G | V | K | A | G | D | I | I | T | S | L | N | G | K | P | L | N | S | F | A | E | L | R | S | R | I | A | T | T | E | P | G | T | K | V | K | L |
Query Conservation |   |
  |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|   |
|   |   |
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
Template Sequence |   |
V | K | R | G | E | L | G | I | X | G | T | E | L | N | S | E | L | A | K | A | X | K | V | D | A | Q | R | G | A | F | V | S | Q | V | L | P | N | S | S | A | A | K | A | G | I | K | A | G | D | V | I | T | S | L | N | G | K | P | I | S | S | F | A | A | L | R | A | Q | V | G | T | X | P | V | G | S | K | L | T | L |
Template Known Secondary structure |   |
|
| B |
|
|
|
|
| S |
|
|
| T | T | S |  |  |  |  | T | S |
|
| T | T |
|
| S |  |  |
|
|
|
| T | T |
| S | S | S | T | T | T | T |
|
| T | T |
|  |  |
| B | S | S | S | S | B |
|
| S | S |  |  |  |  |  |  | T | T | S | S | B | T | T |
|
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . |
  |
  |   |
344 | . | . | . | . | . | 350 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | L | R | N | G | K | P | L | E | V | E | V | T |
Query Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |   |   |   |
|   |
|
|
Template Sequence |   |
G | L | L | R | D | G | K | Q | V | N | V | N | L | E |
Template Known Secondary structure |   |
 |  |  | S | S | S |
|  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|