Job Description P39099 Confidence 96.93% Date Thu Jan 5 11:58:15 GMT 2012 Rank 299 Aligned Residues 185 % Identity 15% Template d1gvkb_ SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases Resolution 0.94

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		P	A	V	V	S	V	R	V	E	G	T	A	S	Q	G	Q	K	I	P	E	E	F	K	K	F	F	G	D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	D	G	R	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																								.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		P	S	Q	I	S	L	Q	Y	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	S	W	A	H	T	C	G	G	T	L	I	R	Q	N	.	.	W	V	M	T	A	A	H	C	V	D	R	E	L	T	F	R	V	V	V	G	E	H	N	L	N	Q	N	N
Template Known Secondary structure		T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T													T	T	.	.						G	G	G	G		S									S		S	B	T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.																									.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
						126	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.														.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query SS confidence		.	.	.	.														.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query Sequence		.	.	.	.	E	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.	.	.	.	.	.	D	I	A	L	L	Q	I	Q	N	P	S	K	.	.	.	.	.	.	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V
Query Conservation		.	.	.	.														.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	E	Q	Y	V	G	V	Q	K	I	V	V	H	P	Y	W	N	T	D	D	V	A	A	G	Y	D	I	A	L	L	R	L	A	Q	S	V	T	L	N	S	Y	V	Q	L	G	V	L	P	R	A	G	T	I	L	A	N	N	S	P	C	Y	I	T	G	W	G	L	T	R	T	N	G	Q	L	A	Q	T	L	Q
Template Known Secondary structure		S														T	T			T	T		G	G	G										S	S					B	T	T	B								T	T					T	T								S		B	S	S	T	T			B		S	B
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.															.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.																				.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.																				.
Query Sequence		S	A	L	G	R	S	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	.	.	.	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	.	G	F	A	I	P	S
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.																				.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.																				.
Template Conservation
Template Sequence		Q	A	Y	L	P	T	V	D	Y	A	I	C	S	S	S	S	Y	W	G	S	T	V	K	N	S	M	V	C	A	G	G	D	G	V	R	S	G	C	Q	G	D	S	G	G	P	L	H	C	L	V	N	G	Q	Y	A	V	H	G	V	T	S	F	V	S	R	L	G	C	N	V	T	R	K	P	T	V	F	T	R	V
Template Known Secondary structure														T	S	T	T	T	T	G	G	G			T	T							S	S	S		B			T	T		T	T								T	T												B	T	T	B	S	S		T	T								G
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	A	R	T	L	A	Q	Q	L	I	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	Y	I	S	W	I	N	N	V	I	A	S
Template Known Secondary structure		G	G	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions