Job Description P39099 Confidence 94.86% Date Thu Jan 5 11:58:15 GMT 2012 Rank 325 Aligned Residues 135 % Identity 19% Template d1cu1a1 SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Viral proteases Resolution 2.50

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	D	I	A	L	L	Q	I	.	Q	N	P	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G
Query Conservation																																																						.
Alig confidence						.	.	.																.	.	.	.	.	.																									.														.	.	.	.	.	.	.
Template Conservation						.	.	.																.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template Sequence		A	T	C	V	.	.	.	N	G	V	C	W	T	V	Y	H	G	A	G	S	K	T	.	.	.	.	.	.	L	A	G	P	K	G	P	I	T	Q	M	Y	T	N	V	D	Q	D	L	V	G	W	Q	A	P	P	G	A	R	S	L	T	P	C	T	C	G	S	.	.	.	.	.	.	.	S	D	L	Y	L	V	T
Template Known Secondary structure						.	.	.	T	T										T	T			.	.	.	.	.	.	B		B	T	T	S		B							T	T	T	T								T	T				B		B			S			.	.	.	.	.	.	.	S
Template Predicted Secondary structure						.	.	.																.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R
Query Conservation
Alig confidence			.	.	.	.										.	.	.	.	.	.	.																																																				.
Template Conservation			.	.	.	.										.	.	.	.	.	.	.																																																				.
Template Sequence		R	.	.	.	.	H	A	D	V	I	P	V	R	R	.	.	.	.	.	.	.	R	G	D	S	R	G	S	L	L	S	P	R	P	V	S	Y	L	K	G	S	S	G	G	P	L	L	C	P	S	G	H	A	V	G	I	F	R	A	A	V	C	T	R	G	V	A	K	A	V	D	F	.	V	P	V	E	S	M	E
Template Known Secondary structure		T	.	.	.	.	T									.	.	.	.	.	.	.		S	S	S										G	G	G	T	T	T		T	T						T	T	S													T	T								.
Template Predicted Secondary structure			.	.	.	.										.	.	.	.	.	.	.																																																				.
Template SS confidence
		109					110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.
		253	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	M	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions