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Job DescriptionP39099
Confidence97.77%DateThu Jan 5 11:58:15 GMT 2012
Rank272Aligned Residues166
% Identity20%Templated1bioa_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120. ........130....... ..140.........150
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Query Sequence  GSGVIINASKGYVLTNNHVINQAQKISIQL. . . . . . . . . . . NDGREFDAKLIGSDDQ. . . . . . . SDIALLQIQNPSK. . .
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Template Sequence  CGGVLVAEQ. . WVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGP
Template Known Secondary structure  TT..
GGGGGG
SSS
S
SBSSS

TT

TT

TT

TT

SS



BT
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   42.......50 .........60.........70.........80.........90.........100.........110.........
 
   151........160.........170.........180.........190 .........200.........210....
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Query Sequence  . . LTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALG. . . . . . . . . . . . . . RSGLNLEGLENFIQTDASINRGNS
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Template Sequence  AVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAESNRRDSCKGDS
Template Known Secondary structure  TB



B

S




TT
SS

STT



SB

STTTTTT


TT

SS
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TTTT
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   119120.........130.........140.........150.........160.........170.........180.........190........
 
   215....220.........230.........240.........250.........260
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Query Sequence  GGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLID
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Template Sequence  GGPLVC. GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVLA
Template Known Secondary structure  T
.TT

S


SS
TTS
GGGG
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   196...200. ........210.........220.........230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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