Job Description P39099 Confidence 99.86% Date Thu Jan 5 11:58:15 GMT 2012 Rank 31 Aligned Residues 161 % Identity 21% Template c3rleA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:golgi reassembly-stacking protein 2; PDBTitle: crystal structure of grasp55 grasp domain (residues 7-208) Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		D	V	Q	R	G	A	F	V	S	E	V	L	P	G	S	G	S	A	K	A	G	V	K	A	G	.	D	I	I	T	S	L	N	G	K	P	L	N	S	F	A	E	L	R	S	R	I	A	T	T	E	P	G	T	K	V	K	L	G	L	L	R	N	G	K	P	L	E	V	E	V	T	L	D	T	S	T	S	S	S
Query Conservation																											.
Alig confidence																											.																																																						.
Template Conservation																																																																																	.
Template Sequence		G	G	T	E	G	Y	H	V	L	R	V	Q	E	N	S	P	G	H	R	A	G	L	E	P	F	F	D	F	I	V	S	I	N	G	S	R	L	N	K	D	N	D	T	L	K	D	L	L	K	A	N	V	E	K	P	V	K	X	L	I	Y	S	S	K	T	L	E	L	R	E	T	S	V	T	P	S	N	L	W	.
Template Known Secondary structure		S	S	S										T	T	S					T	T			T	T	T							T	T					S	S	S	S									T	T	T	S									T	T	T												S	S	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.
Predicted Secondary structure																										.																						.																									.
Query SS confidence																										.																						.																									.
Query Sequence		A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	.	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	L	Q	K	.	D	D	V	I	I	G	V	N	R	D	R	V	N	S	I	A	E	M	R	K	V	L	A	A	.	K	P	A	I	I	A	L	Q
Query Conservation																										.																						.																									.
Alig confidence		.	.	.	.	.																				.																						.											.														.
Template Conservation		.	.	.	.	.																																																					.
Template Sequence		.	.	.	.	.	G	G	Q	G	L	L	G	V	S	I	R	F	C	S	F	D	G	A	N	E	N	V	W	H	V	L	E	V	E	S	N	S	P	A	A	L	A	G	L	R	P	H	S	D	Y	I	I	G	A	D	T	V	.	X	N	E	S	E	D	L	F	S	L	I	E	T	H	E	A	K	P	L	K	L	Y
Template Known Secondary structure		.	.	.	.	.	S	S	S	S	S	S										T	T	G	G	G	S									T	T	S						T			T	T	T							S	S		.			S	S	S									T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.																																																					.
Template SS confidence
							91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		443	.	.			.	.	.	.	450	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		I	V	R	.	.	G	N	E	S	I	Y	L	L	M
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		V	Y	N	T	D	T	D	N	C	R	E	V	I	I
Template Known Secondary structure					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions