Job Description P39099 Confidence 99.84% Date Thu Jan 5 11:58:15 GMT 2012 Rank 32 Aligned Residues 149 % Identity 16% Template c3r0hA_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:inactivation-no-after-potential d protein; PDBTitle: structure of inad pdz45 in complex with ng2 peptide Resolution 2.60 Å

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		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	V	Q	R	G	A	F	V	S	E	V	L	P	G	S	G	S	A	K	A	G	.	V	K	A	G	D	I	I	T	S	L	N	G	K	P	L	N	S	F	A	E	L	R	S	R	I	A	T	T	E	P	G	T	K	V	K	L	G	L	L	R	N	G	K	P	L	E	V	E	V	T	L	D	T	S	T	S	S	S
Query Conservation																							.
Alig confidence																							.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		H	V	T	T	G	C	V	I	T	H	V	Y	P	E	G	Q	V	A	A	D	K	R	L	K	I	F	D	H	I	C	D	I	N	G	T	P	I	H	V	G	S	M	T	T	L	K	V	H	Q	L	F	.	.	.	.	.	.	.	.	.	.	H	T	T	Y	E	K	A	V	T	L	T	V	F	R	A	D	P	P	E
Template Known Secondary structure		S			S									T	T	S										T	T							T	T					G	G	G	S										.	.	.	.	.	.	.	.	.	.		S			S	S										S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560											.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																																												.																	.	.
Query SS confidence																																												.																	.	.
Query Sequence		A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	.	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	I	I	A	L	Q
Query Conservation																																												.																	.	.
Alig confidence																																												.																	.	.
Template Conservation
Template Sequence		L	E	K	F	N	V	D	L	M	K	K	A	G	K	E	L	G	L	S	L	S	P	N	E	I	G	C	T	I	A	D	L	I	Q	G	Q	Y	P	E	I	D	S	K	L	Q	R	G	D	I	I	T	K	F	N	G	D	A	L	E	G	L	P	F	Q	V	C	Y	A	L	F	K	G	A	N	G	K	V	S	M	E
Template Known Secondary structure													T	T											S	S									T	T	S										T	T							T	T				T	T												T			S
Template Predicted Secondary structure
Template SS confidence
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.
		443	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		660	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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