Job Description P39099 Confidence 100.00% Date Thu Jan 5 11:58:15 GMT 2012 Rank 5 Aligned Residues 280 % Identity 51% Template c3pv4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:degq; PDBTitle: structure of legionella fallonii degq (delta-pdz2 variant) Resolution 3.10 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	S	L	A	P	M	L	E	K	V	L	P	A	V	V	S	V	R	V	E	G	T	A	S	Q	G	Q	K	I	P	E	E	F	K	K	F	F	G	D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	P	S	M	A	P	V	L	K	N	I	M	P	A	I	V	N	V	A	V	Q	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	N	R	K	F	E	S	I	G	S	G	V	I	I	D	P	N	N	G	V	I	I	T	N	D	H	V	I	R	N	A	S	L	I	T
Template Known Secondary structure					S								S	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	T	T						T	T	T	S	T	T	B	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	L	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G
Query Conservation
Alig confidence																													.																																														.	.	.	.	.	.	.
Template Conservation																													.																																														.	.	.	.	.	.	.
Template Sequence		V	T	L	Q	D	G	R	R	L	K	A	R	L	I	G	G	D	S	E	T	D	L	A	V	L	K	I	.	D	A	K	N	L	K	S	L	V	I	G	D	S	D	K	L	E	V	G	D	F	V	V	A	I	G	N	P	F	G	L	S	Q	S	A	T	F	G	I	V	S	A	L	K	N	.	.	.	.	.	.	.
Template Known Secondary structure					S	S	S				B								G	G	G	T							.			S	S						B			G	G	G			T	T										S																	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.																																														.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D	F	G	E	I	K	R	G	L	L	G	I	K	G	T	E	M	S	A
Query Conservation
Alig confidence		.	.	.							.	.	.	.																					.	.	.	.	.	.
Template Conservation		.	.	.							.	.	.	.																					.	.	.	.	.	.
Template Sequence		.	.	.	F	I	Q	T	D	A	.	.	.	.	A	I	S	G	G	A	L	V	N	A	K	G	E	L	I	G	I	N	T	A	.	.	.	.	.	.	I	L	V	G	I	G	F	A	I	P	I	N	M	V	K	D	V	A	Q	Q	I	I	K	F	G	S	I	H	R	G	L	M	G	I	F	V	Q	H	L	T	P
Template Known Secondary structure		.	.	.					S	S	.	.	.	.					S					T	T										.	.	.	.	.	.																								S	S						S	T	T
Template Predicted Secondary structure		.	.	.							.	.	.	.																					.	.	.	.	.	.
Template SS confidence
					181	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		D	I	A	K	A	F	N	L	D	V	Q	.	R	G	A	F	V	S	E	V	L	P	G	S	G	S	A	K	A	G	V	K	A	G	D	I	I	T	S	L	N	G	K	P	L	N	S	F	A	E	L	R	S	R	I	A	T	T	E	P	G	T	K	V	K	L	G	L	L	R	N	G	K	P	L	E	V	E	V	T
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		E	L	A	Q	A	M	G	Y	P	E	D	F	Q	G	A	L	V	S	Q	V	N	P	N	S	P	A	E	L	A	G	L	K	A	G	D	I	I	T	Q	I	N	D	T	K	I	T	Q	A	T	Q	V	K	T	T	I	S	L	L	R	V	G	S	T	V	K	I	I	V	E	R	D	N	K	P	L	T	L	S	A	V
Template Known Secondary structure							T	T			S	S											T	T						T	T			T	T							T	T					S	T	T								T	S		S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		358	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		338	.	340

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions