Job Description P39099 Confidence 94.92% Date Thu Jan 5 11:58:15 GMT 2012 Rank 324 Aligned Residues 166 % Identity 14% Template c3govB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:masp-1; PDBTitle: crystal structure of the catalytic region of human masp-1 Resolution 2.55 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																																	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	Q	K	I	S	I	Q	L	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	D
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.
Template Sequence		C	G	G	S	L	L	G	S	S	.	.	W	I	V	T	A	A	H	C	L	H	Q	S	L	D	P	K	D	P	T	L	R	D	S	D	L	L	S	P	S	D	F	K	I	I	L	G	K	H	W	R	L	R	S	D	E	N	E	Q	H	L	G	V	K	H	T	T	L	H	P	Q	Y	D	P	N	T	F	E	N	D
Template Known Secondary structure								T	T	T	.	.						G	G	G	G	B					T	T	S					G	G	G	B			G	G	G						S			B	S	S	S			S	S													T	T		B	T	T	T	T	B	T
Template Predicted Secondary structure											.	.
Template SS confidence
		475	.	.	.	.	480	.	.	.			.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
		140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190												.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure											.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	L	L	Q	I	Q	N	P	.	.	.	.	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	.	.	.	.	.	.	.	.	.	.	.	R	S	G	L	N	L	E	G	L	E	N	F	I	Q
Query Conservation											.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	L	V	E	L	L	E	S	P	V	L	N	A	F	V	M	P	I	C	L	P	E	G	P	Q	Q	E	G	A	M	V	I	V	S	G	W	G	K	Q	F	L	Q	R	F	P	E	T	L	M	E	I	E	I	P	I	V	D	H	S	T	C	Q	K	A	Y	A	P	L	K	K	K	V	T	R	D	M	I	C	A
Template Known Secondary structure								S	S					S	S	S					B			S	S				T	T									S			T	T	S				S	B																		T	T	T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
		205	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure							.	.	.	.																.	.	.	.	.
Query SS confidence							.	.	.	.																.	.	.	.	.
Query Sequence		T	D	A	S	I	.	.	.	.	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	.	.	.	.	.	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D
Query Conservation							.	.	.	.																.	.	.	.	.
Alig confidence							.	.	.	.																.	.	.	.	.											.
Template Conservation																																									.
Template Sequence		G	E	K	E	G	G	K	D	A	C	A	G	D	S	G	G	P	M	V	T	L	N	R	E	R	G	Q	W	Y	L	V	G	T	V	S	W	G	D	D	.	C	G	K	K	D	R	Y	G	V	Y	S	Y	I	H	H	N	K	D	W	I	Q	R	V	T	G
Template Known Secondary structure		S		T	T				B			T	T		T	T								T	T	T													S	S	.	S	S		S	S								T	T	T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		633	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.		.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions