Job Description P39099 Confidence 97.24% Date Thu Jan 5 11:58:15 GMT 2012 Rank 289 Aligned Residues 181 % Identity 16% Template c3fzzB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:granzyme c; PDBTitle: structure of grc Resolution 2.50 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.
Query Sequence		P	A	V	V	S	V	R	V	E	G	T	A	S	Q	G	Q	K	I	P	E	E	F	K	K	F	F	G	D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	.	.	.	.	.	.	.	D
Query Conservation																																																																										.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																					.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		P	Y	M	A	Y	Y	E	F	L	K	V	G	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	F	C	G	G	F	L	V	R	D	K	.	.	F	V	L	T	A	A	H	C	K	G	R	S	M	T	V	T	L	G	A	H	N	I	K	A	K	E	E	T
Template Known Secondary structure		T	T									S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	.	.						T	T											S		S	B	T	T	S			T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.																									.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																	.	.	.	.	.	.	.													.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.													.	.	.	.	.
Query Sequence		G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.	.	.	.	D	I	A	L	L	Q	I	Q	N	P	S	K	.	.	.	.	.	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R
Query Conservation																	.	.	.	.	.	.	.													.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	I	I	P	V	A	K	A	I	P	H	P	D	Y	N	P	D	D	R	S	N	D	I	M	L	L	K	L	V	R	N	A	K	R	T	R	A	V	R	P	L	N	L	P	R	R	N	A	H	V	K	P	G	D	E	C	Y	V	A	G	W	G	K	V	T	P	D	G	E	F	P	K	T	L	H	E	V	K	L
Template Known Secondary structure														T	T		B	T	T	T	T	B	T								S	S					B	T	T	B								T	T					T	T								S	S		S	S	T	T	S				S	B
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
																	192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																	.	.	.
Template Conservation																																														.																	.	.	.
Template Sequence		T	V	Q	K	D	Q	V	C	E	S	Q	F	Q	S	S	Y	N	R	A	N	E	I	C	V	G	D	S	K	I	K	G	A	S	F	E	E	D	S	G	G	P	L	V	C	.	K	R	A	A	A	G	I	V	S	Y	G	Q	T	D	G	S	.	.	.	A	P	Q	V	F	T	R	V	L	S	F	V	S	W	I	K
Template Known Secondary structure			B											T	T	T			T	T	T								S	S		B			T	T	T	T	T	T						.	T	T											T	T		S	.	.	.	S	S						G	G	G	T
Template Predicted Secondary structure																																														.																	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		257	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	M	K	H
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions