 |
Job Description | P39099 | Confidence | 98.86% | Date | Thu Jan 5 11:58:15 GMT 2012 |
Rank | 236 | Aligned Residues | 71 |
% Identity | 24% | Template | c3bpuA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:membrane-associated guanylate kinase, ww and pdz domain- |
PDBTitle: crystal structure of the 3rd pdz domain of human membrane associated2 guanylate kinase, c677s and c709s double mutant
|
Resolution | 1.60 Å |
|
 |
  |   |
373 | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | |
|
. | . | . | . | . | . | 430 | . | . | . | . | . | |
|
. | . | . | . | 440 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | L | E | G | A | T | L | S | D | G | Q | L | K | D | G | G | K | G | I | K | I | D | E | V | V | K | G | S | P | A | A | Q | A | G | L | Q | K | D | D | V | I | I | G | V | N | R | D | R | V | N | . |
. |
S | I | A | E | M | R | K | V | L | A | A | K | . |
. |
P | A | I | I | A | L | Q | I | V | R | G | N | E |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|
|   |
|   |   |
|
|
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   | . | . |
|   |   |   |   |   |   |
|
|   |   |   | . | . |   |   |   |
|   |
|   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|
|   |
|   |   |   | . |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   | . | . | . | . |
|   |   |
|
|   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|   |   |
|   |
|   |
|   |
|   |   |   |
Template Sequence |   |
K | G | P | M | G | F | G | F | T | I | A | D | S | . |
P | G | G | G | G | Q | R | V | K | Q | I | V | D | R | S | R | G | . |
. |
. |
. |
L | K | E | G | D | L | I | V | E | V | N | K | K | N | V | Q | A | L | T | H | N | Q | V | V | D | M | L | V | E | S | P | K | G | S | E | V | T | L | L | V | Q | R | Q | T | R |
Template Known Secondary structure |   |
| B | T | T | B | S | S |
|  |  |  |  |
| . | T | T | S | S | S |  |  |  |  |  |
|
|
|
|
| T | T | . | . | . | . |
|
| T | T |
|  |  |  |  |  | T | T |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  | T | S |
| T | T |
|  |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
648 | . | 650 | . | . | . | . | . | . | . | . | . | 660 | |
. | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | |
|
|
|
. | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|