Job Description P39099 Confidence 99.11% Date Thu Jan 5 11:58:15 GMT 2012 Rank 142 Aligned Residues 82 % Identity 15% Template c3b76A_ PDB info PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase lnx; PDBTitle: crystal structure of the third pdz domain of human ligand-of-numb2 protein-x (lnx1) in complex with the c-terminal peptide from the3 coxsackievirus and adenovirus receptor Resolution 1.75 Å

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		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390				.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.																		.																	.	.
Query SS confidence																													.	.	.																		.																	.	.
Query Sequence		S	S	A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	.	.	.	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	.	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A
Query Conservation																													.	.	.																		.																	.	.
Alig confidence																													.	.	.																		.																	.	.
Template Conservation
Template Sequence		H	E	K	V	V	N	I	Q	K	D	P	G	E	S	L	G	M	T	V	A	G	G	A	S	H	R	E	W	D	L	P	I	Y	V	I	S	V	E	P	G	G	V	I	S	R	D	G	R	I	K	T	G	D	I	L	L	N	V	D	G	V	E	L	T	E	V	S	R	S	E	A	V	A	L	L	K	R	T	S	S
Template Known Secondary structure												T	T											S		S	T	T												T	T	S							S	S		T	T							T	T			G	G	G	S											S			S
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		438	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	A	L	Q	I	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	V	L	K	A	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		488	.	490	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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