Job Description P39099 Confidence 95.77% Date Thu Jan 5 11:58:15 GMT 2012 Rank 319 Aligned Residues 168 % Identity 16% Template c2zghA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:granzyme m; PDBTitle: crystal structure of active granzyme m bound to its product Resolution 2.17 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.									.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.						.	150
Predicted Secondary structure																																					.	.	.	.	.	.	.	.												.	.	.	.	.	.	.													.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.												.	.	.	.	.	.	.													.	.	.	.	.
Query Sequence		L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	D	G	R	.	.	.	.	.	.	.	.	E	F	D	A	K	L	I	G	S	D	D	.	.	.	.	.	.	.	Q	S	D	I	A	L	L	Q	I	Q	N	P	.	.	.	.	.	S	K
Query Conservation																																					.	.	.	.	.	.	.	.												.	.	.	.	.	.	.													.	.	.	.	.
Alig confidence												.	.																								.	.	.	.	.	.	.	.												.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation												.	.
Template Sequence		L	C	G	G	V	L	V	H	P	K	.	.	W	V	L	T	A	A	H	C	L	A	Q	R	M	A	Q	L	R	L	V	L	G	L	H	T	L	D	S	P	G	L	T	F	H	I	K	A	A	I	Q	H	P	R	Y	K	P	V	P	A	L	E	N	D	L	A	L	L	Q	L	D	G	K	V	K	P	S	R	T	I
Template Known Secondary structure										T	T	.	.						G	G	G	G		S		G	G	G						S		S	B	S	S	S														T	T		B		T	T	S		B	S								S	S						S	S
Template Predicted Secondary structure												.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.									.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.									210	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Query Sequence		L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	.	.	.	.	.	.	.	.	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	.	.	.	.	.	.	.	.	N	R	G	N	S
Query Conservation																											.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	L	A	L	P	S	K	R	Q	V	V	A	A	G	T	R	C	S	M	A	G	W	G	L	T	H	Q	G	G	R	L	S	R	V	L	R	E	L	D	L	Q	V	L	D	T	R	M	C	N	N	S	R	F	W	N	G	S	L	S	P	S	M	V	C	L	A	A	D	S	K	D	Q	A	P	C	K	G	D	S
Template Known Secondary structure									T	T					T	T										B	S	S	T	T			B		S	B															T	S	T	T	T	T	T	T				T	T							S	S	T	T		B			T	T		T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		215	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		G	G	A	L	L	N	L	N	G	.	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		G	G	P	L	V	C	G	K	G	R	V	L	A	G	V	L	S	F	S	S	R	V	C	T	D	I	F	K	P	P	V	A	T	A	V	A	P	Y	V	S	W	I	R	K	V	T	G
Template Known Secondary structure		T						T	T	T	T											S	S	T	T		T	T	S							S	G	G	G									T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions