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Job DescriptionP39099
Confidence99.07%DateThu Jan 5 11:58:15 GMT 2012
Rank170Aligned Residues83
% Identity18%Templatec2z17A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:pleckstrin homology sec7 and coiled-coil domains- PDBTitle: crystal sturcture of pdz domain from human pleckstrin2 homology, sec7
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   361........370.........380. ........390.........400.........410.........420... ......430...
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Query Sequence  STSSSASAEMITPALEGATLS. . . . . DGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVN. . SIAEMRKVLA
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Template Sequence  SQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIR
Template Known Secondary structure  S




TTS

S





SSS

S


TTST

TT
B

TT
TT

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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   434.....440...
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Query Sequence  AKPAIIALQI
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Template Sequence  SSGNLLTIET
Template Known Secondary structure  TTT
Template Predicted Secondary structure 



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   94.....100...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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