Job Description P39099 Confidence 98.95% Date Thu Jan 5 11:58:15 GMT 2012 Rank 220 Aligned Residues 88 % Identity 17% Template c2yubA_ PDB info PDB header:transferase Chain: A: PDB Molecule:lim domain kinase 2; PDBTitle: solution structure of the pdz domain from mouse lim domain2 kinase Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.				.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.
Predicted Secondary structure																											.	.	.																			.	.																							.	.
Query SS confidence																											.	.	.																			.	.																							.	.
Query Sequence		D	T	S	T	S	S	S	A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	.	.	.	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	.	.	P	A	A	Q	A	G	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V
Query Conservation																											.	.	.																			.	.																							.	.
Alig confidence																											.	.	.																			.	.																							.	.
Template Conservation
Template Sequence		D	Q	L	P	Y	S	V	T	L	I	S	M	P	A	T	T	E	C	R	R	G	F	S	V	T	V	E	S	A	S	S	N	Y	A	T	T	V	Q	V	K	E	V	N	R	M	H	I	S	P	N	N	R	N	A	I	H	P	G	D	R	I	L	E	I	N	G	T	P	V	R	T	L	R	V	E	E	V	E	D	A
Template Known Secondary structure				S											S		S	S	S	S		S	S							T	T	S	S	S											T	T	T	S		T	T							T	T							S	S	S	B	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	K	P	A	I	I	A	L	Q	I	V	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	Q	T	S	Q	T	L	Q	L	L	I	E	H	D
Template Known Secondary structure						S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions